FC925328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_METS3 (50S ribosomal protein L37Ae OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.864e-13 Identity = 33/82 (40.24%), Postives = 46/82 (56.10%), Query Frame = 3 Query: 90 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL 335 TKK GI G++G RYG ++ +K +E + + C C + VKR+A GIW C+ CG V GGAY T A + IR + Sbjct: 4 TKKVGITGRFGARYGRKAKRSVKMIEENMKKNHVCPRCDRPYVKRQAAGIWKCRKCGAVFTGGAYVPETPMAKSAARNIRNV 85
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_METVS (50S ribosomal protein L37Ae OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.046e-13 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 3 Query: 90 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 341 TKK G G++G RYG +R +++ +E+ Q+ +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGPRYGRKIRVRLRDVEIKQNKEYKCPVCAFPKLKRAGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_METM7 (50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.591e-13 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 3 Query: 90 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 341 TKK G G++G+RYG +R +++ +E+ Q +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRVGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_METM6 (50S ribosomal protein L37Ae OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.591e-13 Identity = 34/84 (40.48%), Postives = 47/84 (55.95%), Query Frame = 3 Query: 90 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLRE 341 TKK G G++G+RYG +R +++ +E+ Q +Y C C +KR IW C CG AGGAYT T + V IRR+ E Sbjct: 7 TKKIGSAGRFGSRYGRKIRVRLRDVEIKQKKEYKCPVCAFPKLKRVGTSIWVCDKCGAKIAGGAYTPETGAGKVVTKAIRRVIE 90
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_THESM (50S ribosomal protein L37Ae OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 3.271e-12 Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 3 Query: 90 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAY 284 TKK G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY Sbjct: 4 TKKVGSAGRFGPRYGLKIRRRVAAVEEKMRQKHTCPVCGRKAVRRISTGIWQCQKCGATFAGGAY 68
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_METST (50S ribosomal protein L37Ae OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12 Identity = 30/80 (37.50%), Postives = 43/80 (53.75%), Query Frame = 3 Query: 96 KAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL 335 K G G++G RYG ++ +K +E H+K+ C C + VKR GIW C+ CG V GGAY T + I+R+ Sbjct: 6 KVGSTGRFGARYGRKAKRTVKDIEDKMHAKHVCPKCDRPGVKRTHAGIWKCRKCGAVFTGGAYIPTTPMGKVAKRNIKRI 85
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_ARCFU (50S ribosomal protein L37Ae OS=Archaeoglobus fulgidus GN=rpl37ae PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12 Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 3 Query: 90 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTI 326 TKK G++G RYG +R+ ++E Q KY C+ CGK AVKR GIW C+ CG AGG Y T V ++ Sbjct: 4 TKKVRSAGRFGPRYGLRVRRTWLEIEAVQRQKYVCKKCGKKAVKRSGTGIWECRHCGYKFAGGCYQPVTPGGKIVEKSV 82
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_THEON (50S ribosomal protein L37Ae OS=Thermococcus onnurineus (strain NA1) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.287e-12 Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 3 Query: 90 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAY 284 T K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY Sbjct: 4 TTKVGSAGRFGPRYGLKIRRRVAAVEAKMKQKHICPVCGRKAVRRISTGIWQCQKCGATFAGGAY 68
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_THEGJ (50S ribosomal protein L37Ae OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.287e-12 Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 3 Query: 90 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTI 326 T K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY T + + + Sbjct: 4 TVKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPTTPAGKVAKRVV 82
BLAST of FC925328 vs. ExPASy Swiss-Prot
Match: RL37A_PYRKO (50S ribosomal protein L37Ae OS=Pyrococcus kodakaraensis GN=rpl37ae PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.287e-12 Identity = 33/79 (41.77%), Postives = 45/79 (56.96%), Query Frame = 3 Query: 90 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNT-ASAVTVRST 323 T K G G++G RYG +R+++ +E K+ C CG+ AV+R + GIW C+ CG AGGAY T A V R T Sbjct: 4 TTKVGSAGRFGPRYGLKIRRRVAAVEARMKQKHVCPVCGRKAVRRISTGIWQCQKCGATFAGGAYLPTTPAGKVAKRVT 82 The following BLAST results are available for this feature:
BLAST of FC925328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925328 ID=FC925328; Name=FC925328; organism=Citrus clementina; type=EST; length=528bpback to top |