FC925329

Overview
NameFC925329
Unique NameFC925329
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length615
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925329 vs. ExPASy Swiss-Prot
Match: FER_ATRBE (Ferredoxin OS=Atropa belladonna PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.390e-37
Identity = 72/97 (74.23%), Postives = 82/97 (84.54%), Query Frame = 2
Query:  206 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEELAG 496
            ATYKVKL+TP G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEEEL G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEELTG 97          
BLAST of FC925329 vs. ExPASy Swiss-Prot
Match: FER1_APHFL (Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.390e-37
Identity = 74/97 (76.29%), Postives = 85/97 (87.63%), Query Frame = 2
Query:  203 MATYKVKLI-TPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 490
            MATYKV LI   G    I+CPDD++ILDAAEEAGLDLPYSCRAGACS+C GK+V+GT+DQS+QSFLDDDQ+  G+VLTC AYPTSDVTIETHKEE+L
Sbjct:    1 MATYKVTLIDAEGTTTTIDCPDDTYILDAAEEAGLDLPYSCRAGACSTCAGKLVTGTIDQSDQSFLDDDQVEAGYVLTCVAYPTSDVTIETHKEEDL 97          
BLAST of FC925329 vs. ExPASy Swiss-Prot
Match: FER_SOLAB (Ferredoxin OS=Solanum abutiloides PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.816e-37
Identity = 71/95 (74.74%), Postives = 80/95 (84.21%), Query Frame = 2
Query:  206 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 490
            ATYKVKL+TP G  E  CPDD +ILD AEE G DLPYSCRAG+CSSC GK+ +G+VDQS+ +FLDDDQI +GFVLTC AYP SDVTIETHKEEEL
Sbjct:    1 ATYKVKLVTPDGPVEFECPDDEYILDRAEEEGHDLPYSCRAGSCSSCAGKIAAGSVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of FC925329 vs. ExPASy Swiss-Prot
Match: FER_GLEJA (Ferredoxin OS=Gleichenia japonica PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.816e-37
Identity = 72/95 (75.79%), Postives = 79/95 (83.16%), Query Frame = 2
Query:  206 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 490
            A +KVK +TP GE  I  PDD FILDA EEAGLDLPYSCRAGACSSCTGK++ G VDQSEQSFLDDDQ+ EGFVLTC AYP  D+TIETH EE+L
Sbjct:    1 AIFKVKFLTPDGERTIEVPDDKFILDAGEEAGLDLPYSCRAGACSSCTGKLLDGRVDQSEQSFLDDDQMAEGFVLTCVAYPAGDITIETHAEEKL 95          
BLAST of FC925329 vs. ExPASy Swiss-Prot
Match: FER_SOLNI (Ferredoxin OS=Solanum nigrum PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.371e-37
Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 2
Query:  206 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEELAG 496
            ATYKVKL+TP G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEE+L G
Sbjct:    1 ATYKVKLVTPDGPIEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPKSDVTIETHKEEDLTG 97          
BLAST of FC925329 vs. ExPASy Swiss-Prot
Match: FER_PHYAF (Ferredoxin OS=Physalis alkekengi var. francheti PE=1 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.371e-37
Identity = 72/95 (75.79%), Postives = 81/95 (85.26%), Query Frame = 2
Query:  206 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 490
            ATYKVKLITP G    +CPD+ +ILDAAEE G DLPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEEEL
Sbjct:    1 ATYKVKLITPDGPVVFDCPDNEYILDAAEEQGHDLPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQVADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of FC925329 vs. ExPASy Swiss-Prot
Match: FER_LYCCN (Ferredoxin OS=Lycium chinense PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.097e-37
Identity = 72/97 (74.23%), Postives = 81/97 (83.51%), Query Frame = 2
Query:  206 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEELAG 496
            ATYKVKL+TP G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQI +GFVLTC AYP SDVTIETHKEE L G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQIADGFVLTCVAYPQSDVTIETHKEEALTG 97          
BLAST of FC925329 vs. ExPASy Swiss-Prot
Match: FER2_SPIOL (Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.097e-37
Identity = 72/95 (75.79%), Postives = 81/95 (85.26%), Query Frame = 2
Query:  206 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 490
            ATYKV L+TP G + I C DD +ILDAAEE G+DLPYSCRAGACSSC GKV SG+VDQS+QSFL+D Q+ EG+VLTC AYPT DVTIETHKEEEL
Sbjct:    1 ATYKVTLVTPSGSQVIECGDDEYILDAAEEKGMDLPYSCRAGACSSCAGKVTSGSVDQSDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEEL 95          
BLAST of FC925329 vs. ExPASy Swiss-Prot
Match: FER2_HYONI (Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.097e-37
Identity = 71/97 (73.20%), Postives = 82/97 (84.54%), Query Frame = 2
Query:  206 ATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEELAG 496
            ATYKVKL+TP G  E +CPDD +ILD AEE G +LPYSCRAG+CSSC GKV +GTVDQS+ +FLDDDQ+ +GFVLTC AYP SDVTIETHKEE+L G
Sbjct:    1 ATYKVKLVTPDGPVEFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVKAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEDLTG 97          
BLAST of FC925329 vs. ExPASy Swiss-Prot
Match: FER1_ORYSJ (Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. japonica GN=ADI1 PE=1 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.045e-37
Identity = 72/102 (70.59%), Postives = 83/102 (81.37%), Query Frame = 2
Query:  185 GGRVVAMATYKVKLITPGGEEEINCPDDSFILDAAEEAGLDLPYSCRAGACSSCTGKVVSGTVDQSEQSFLDDDQIGEGFVLTCAAYPTSDVTIETHKEEEL 490
            G R+   ATY VKLITP GE E+  PDD +ILD AEE G+DLPYSCRAG+CSSC GKVVSG +DQS+QSFLDDDQ+  G+VLTC AYP SDV IETHKE++L
Sbjct:   37 GDRLRMQATYNVKLITPDGEVELQVPDDVYILDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSDVVIETHKEDDL 138          
The following BLAST results are available for this feature:
BLAST of FC925329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
FER_ATRBE1.390e-3774.23Ferredoxin OS=Atropa belladonna PE=1 SV=1[more]
FER1_APHFL1.390e-3776.29Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2[more]
FER_SOLAB1.816e-3774.74Ferredoxin OS=Solanum abutiloides PE=1 SV=1[more]
FER_GLEJA1.816e-3775.79Ferredoxin OS=Gleichenia japonica PE=1 SV=1[more]
FER_SOLNI2.371e-3773.20Ferredoxin OS=Solanum nigrum PE=1 SV=1[more]
FER_PHYAF2.371e-3775.79Ferredoxin OS=Physalis alkekengi var. francheti PE... [more]
FER_LYCCN3.097e-3774.23Ferredoxin OS=Lycium chinense PE=1 SV=1[more]
FER2_SPIOL3.097e-3775.79Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1[more]
FER2_HYONI3.097e-3773.20Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1[more]
FER1_ORYSJ4.045e-3770.59Ferredoxin-1, chloroplastic OS=Oryza sativa subsp.... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YH17FM1 TF Citrus clementina cDNA clone KN0AAP8YH17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925329 ID=FC925329; Name=FC925329; organism=Citrus clementina; type=EST; length=615bp
CTTTATCTTGTCATACTCAAAACCAAAAACTCAACTGTCCCTTCCTTGAG
CAAGAGCAGCAACAATGGCCACCCTCTCAAGCGCCATGGTCAGCACCTCA
TTCATCAGAAGCAAGCCTACAGCGACCAGCCTCAAAGCCATGCCTAACAT
GGGTCAGGCTATATTTGGCCTCAAAGCCAACAGAGGTGGCCGTGTTGTAG
CCATGGCTACATACAAAGTCAAGCTCATTACACCTGGGGGAGAGGAAGAA
ATCAACTGTCCTGATGACTCGTTTATTCTTGATGCTGCTGAAGAAGCTGG
GCTTGATCTTCCGTACTCATGCAGGGCTGGGGCTTGCTCTTCCTGTACTG
GGAAAGTTGTGTCTGGAACCGTTGACCAGTCGGAGCAAAGCTTTCTGGAT
GATGATCAAATTGGAGAAGGTTTTGTTCTCACTTGTGCTGCTTATCCAAC
AAGTGATGTTACTATAGAGACTCACAAGGAAGAGGAGCTCGCTGGTTAAT
AATGTGCTCTTGATATCTCATTATTATCTTCTCTTTTATGTGTTGTGTTT
TGTCTGATTATTTTAATGCTTTGAAAGGGATATTGAGTAATTTGAGAAAA
AAAAAAAAAAAAAAA
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