FC925331

Overview
NameFC925331
Unique NameFC925331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1D_BOVIN (Casein kinase I isoform delta OS=Bos taurus GN=CSNK1D PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 6.764e-42
Identity = 84/184 (45.65%), Postives = 126/184 (68.48%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKY--------QQTQKTKSQDLLPASRVTNSRVMP-MRTDKLKGVNDASCSAEVLECRGSYNRT-RPDADMQHRPSVAEKM 522
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EFA+Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+         + ++   ++ L  SR   +R +P   + +L+G  + +    +     + N + RP + M+    V+ ++
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGASRAADDAERERRDREERLRHSRNPATRGLPSTASGRLRGTQEVAPPTPLTPTSHTANTSPRPVSGMERERKVSMRL 373          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1DA_DANRE (Casein kinase I isoform delta-A OS=Danio rerio GN=csnk1da PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 6.764e-42
Identity = 85/185 (45.95%), Postives = 123/185 (66.49%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKY------QQTQKTKSQDLLPASRVTNSRVM-PMRTDKLKGVNDASCSAEVL-ECRGSYNRTRPDADMQHRPSVAEKMSSD 531
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EFA+Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+       +  +   ++ +   R+   RVM P  + + +G  + + +  +  +      R R  +   HR +     SSD
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGGAREDPERDRRDREERIRQGRIPLPRVMLPTSSGRPRGTQEVAPAPPLTPDSHTGMERERKVSMRLHRGAPVNVSSSD 374          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1E_CHICK (Casein kinase I isoform epsilon OS=Gallus gallus GN=CSNK1E PE=2 SV=2)

HSP 1 Score: 168.318 bits (425), Expect = 2.570e-41
Identity = 72/116 (62.07%), Postives = 97/116 (83.62%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQD 348
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EF++Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+   +  +  D
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARNPEDMD 305          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1E_MOUSE (Casein kinase I isoform epsilon OS=Mus musculus GN=Csnk1e PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 4.384e-41
Identity = 72/116 (62.07%), Postives = 97/116 (83.62%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQD 348
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EF++Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+   +  +  D
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARNPEDVD 305          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1E_HUMAN (Casein kinase I isoform epsilon OS=Homo sapiens GN=CSNK1E PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.384e-41
Identity = 72/116 (62.07%), Postives = 97/116 (83.62%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQD 348
            QSRRDDLESLGYVL+YF  GSLPWQGLKAATK+QKY++I EKK+STPIEVLCK +P+EF++Y ++C+SL FD +PDY +L++LF +LF R+G+ +D+VFDW +LK+   +  +  D
Sbjct:  190 QSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFSTYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNMLKFGAARNPEDVD 305          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: HHP1_SCHPO (Casein kinase I homolog hhp1 OS=Schizosaccharomyces pombe GN=hhp1 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 4.384e-41
Identity = 76/130 (58.46%), Postives = 95/130 (73.08%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKSQDLLPASRVTNSRVMP 390
            QSRRDDLESLGYVL+YF RGSLPWQGLKA TKKQKY+KI EKK+STP EVLC+  P EF+ Y +Y +SL FD +PDY +L++LF DLF R+ Y+FD++FDWT+ +  Q  +   Q L      T   + P
Sbjct:  192 QSRRDDLESLGYVLVYFCRGSLPWQGLKATTKKQKYEKIMEKKISTPTEVLCRGFPQEFSIYLNYTRSLRFDDKPDYAYLRKLFRDLFCRQSYEFDYMFDWTLKRKTQQDQQHQQQLQQQLSATPQAINP 321          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1_PLAYO (Casein kinase I OS=Plasmodium yoelii yoelii GN=CK1 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.142e-39
Identity = 71/113 (62.83%), Postives = 90/113 (79.65%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTK 339
            QSRRDD+E+LGYVL+YFLRGSLPWQGLKA +KK KYDKI EKK+ST +EVLC++   EF +Y +YC+SL F+ RPDY +L+RL  DLF REG+ +DF+FDWT +   +  K K
Sbjct:  190 QSRRDDIEALGYVLMYFLRGSLPWQGLKAISKKDKYDKIMEKKISTSVEVLCRNTSFEFVTYLNYCRSLRFEDRPDYTYLRRLLKDLFIREGFTYDFLFDWTCVYASEKDKKK 302          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1_PLAF7 (Casein kinase I OS=Plasmodium falciparum (isolate 3D7) GN=CK1 PE=3 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.142e-39
Identity = 71/113 (62.83%), Postives = 90/113 (79.65%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTK 339
            QSRRDD+E+LGYVL+YFLRGSLPWQGLKA +KK KYDKI EKK+ST +EVLC++   EF +Y +YC+SL F+ RPDY +L+RL  DLF REG+ +DF+FDWT +   +  K K
Sbjct:  190 QSRRDDIEALGYVLMYFLRGSLPWQGLKAISKKDKYDKIMEKKISTSVEVLCRNASFEFVTYLNYCRSLRFEDRPDYTYLRRLLKDLFIREGFTYDFLFDWTCVYASEKDKKK 302          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1_PLAF4 (Casein kinase I OS=Plasmodium falciparum (isolate Dd2) GN=CK1 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 9.142e-39
Identity = 71/113 (62.83%), Postives = 90/113 (79.65%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTK 339
            QSRRDD+E+LGYVL+YFLRGSLPWQGLKA +KK KYDKI EKK+ST +EVLC++   EF +Y +YC+SL F+ RPDY +L+RL  DLF REG+ +DF+FDWT +   +  K K
Sbjct:  190 QSRRDDIEALGYVLMYFLRGSLPWQGLKAISKKDKYDKIMEKKISTSVEVLCRNASFEFVTYLNYCRSLRFEDRPDYTYLRRLLKDLFIREGFTYDFLFDWTCVYASEKDKKK 302          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1A_XENLA (Casein kinase I isoform alpha OS=Xenopus laevis GN=csnk1a1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.037e-38
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKS 342
            QSRRDD+ESLGYVL+YF R SLPWQGLKAATKKQKY+KI EKK+STP+EVLCK  PAEFA Y +YC+ L F++ PDY +L++LF  LF    + +D+ FDWT+LK +  Q+  S
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311          
The following BLAST results are available for this feature:
BLAST of FC925331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
KC1D_BOVIN6.764e-4245.65Casein kinase I isoform delta OS=Bos taurus GN=CSN... [more]
KC1DA_DANRE6.764e-4245.95Casein kinase I isoform delta-A OS=Danio rerio GN=... [more]
KC1E_CHICK2.570e-4162.07Casein kinase I isoform epsilon OS=Gallus gallus G... [more]
KC1E_MOUSE4.384e-4162.07Casein kinase I isoform epsilon OS=Mus musculus GN... [more]
KC1E_HUMAN4.384e-4162.07Casein kinase I isoform epsilon OS=Homo sapiens GN... [more]
HHP1_SCHPO4.384e-4158.46Casein kinase I homolog hhp1 OS=Schizosaccharomyce... [more]
KC1_PLAYO9.142e-3962.83Casein kinase I OS=Plasmodium yoelii yoelii GN=CK1... [more]
KC1_PLAF79.142e-3962.83Casein kinase I OS=Plasmodium falciparum (isolate ... [more]
KC1_PLAF49.142e-3962.83Casein kinase I OS=Plasmodium falciparum (isolate ... [more]
KC1A_XENLA2.037e-3863.16Casein kinase I isoform alpha OS=Xenopus laevis GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YG07FM1 TF Citrus clementina cDNA clone KN0AAP3YG07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925331 ID=FC925331; Name=FC925331; organism=Citrus clementina; type=EST; length=596bp
CAAAGCCGTCGGGATGATTTAGAGTCTCTTGGCTATGTTCTGTTGTATTT
TTTACGAGGAAGCCTCCCTTGGCAGGGTCTAAAAGCTGCCACAAAAAAGC
AAAAGTATGACAAAATATGTGAGAAGAAGGTATCAACACCTATTGAGGTC
CTTTGCAAGTCTCATCCTGCGGAATTTGCATCTTATTTCCATTATTGCCA
ATCTTTAACCTTTGACCAGCGGCCTGATTATGGATTCTTGAAGCGTTTGT
TCCATGACTTGTTTTCTCGAGAAGGATATGATTTTGATTTTGTGTTTGAC
TGGACCATTCTCAAGTACCAGCAGACACAAAAGACGAAGTCACAGGATTT
GCTGCCAGCTTCTAGAGTGACTAACAGTCGGGTAATGCCAATGCGCACTG
ATAAGCTTAAAGGAGTCAATGACGCTTCTTGTTCAGCAGAGGTTCTGGAG
TGCAGAGGATCATATAATCGCACTCGCCCAGATGCAGATATGCAGCATAG
GCCATCAGTAGCTGAGAAAATGAGTTCTGATCATCAATTTGGGAAACATA
GTATGGGCAATGCATCAATTCCGTCTGCTTCAATTGTTCTGCCCCA
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