FC925331

Overview
NameFC925331
Unique NameFC925331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1A_SHEEP (Casein kinase I isoform alpha OS=Ovis aries GN=CSNK1A1 PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.037e-38
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKS 342
            QSRRDD+ESLGYVL+YF R SLPWQGLKAATKKQKY+KI EKK+STP+EVLCK  PAEFA Y +YC+ L F++ PDY +L++LF  LF    + +D+ FDWT+LK +  Q+  S
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1A_RAT (Casein kinase I isoform alpha OS=Rattus norvegicus GN=Csnk1a1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.037e-38
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKS 342
            QSRRDD+ESLGYVL+YF R SLPWQGLKAATKKQKY+KI EKK+STP+EVLCK  PAEFA Y +YC+ L F++ PDY +L++LF  LF    + +D+ FDWT+LK +  Q+  S
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1A_RABIT (Casein kinase I isoform alpha OS=Oryctolagus cuniculus GN=CSNK1A1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.037e-38
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKS 342
            QSRRDD+ESLGYVL+YF R SLPWQGLKAATKKQKY+KI EKK+STP+EVLCK  PAEFA Y +YC+ L F++ PDY +L++LF  LF    + +D+ FDWT+LK +  Q+  S
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1A_MOUSE (Casein kinase I isoform alpha OS=Mus musculus GN=Csnk1a1 PE=2 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.037e-38
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKS 342
            QSRRDD+ESLGYVL+YF R SLPWQGLKAATKKQKY+KI EKK+STP+EVLCK  PAEFA Y +YC+ L F++ PDY +L++LF  LF    + +D+ FDWT+LK +  Q+  S
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1A_HUMAN (Casein kinase I isoform alpha OS=Homo sapiens GN=CSNK1A1 PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.037e-38
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKS 342
            QSRRDD+ESLGYVL+YF R SLPWQGLKAATKKQKY+KI EKK+STP+EVLCK  PAEFA Y +YC+ L F++ PDY +L++LF  LF    + +D+ FDWT+LK +  Q+  S
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1A_CHICK (Casein kinase I isoform alpha OS=Gallus gallus GN=CSNK1A1 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.037e-38
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKS 342
            QSRRDD+ESLGYVL+YF R SLPWQGLKAATKKQKY+KI EKK+STP+EVLCK  PAEFA Y +YC+ L F++ PDY +L++LF  LF    + +D+ FDWT+LK +  Q+  S
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1A_BOVIN (Casein kinase I isoform alpha OS=Bos taurus GN=CSNK1A1 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.037e-38
Identity = 72/114 (63.16%), Postives = 90/114 (78.95%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKS 342
            QSRRDD+ESLGYVL+YF R SLPWQGLKAATKKQKY+KI EKK+STP+EVLCK  PAEFA Y +YC+ L F++ PDY +L++LF  LF    + +D+ FDWT+LK +  Q+  S
Sbjct:  198 QSRRDDMESLGYVLMYFNRTSLPWQGLKAATKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEAPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: HHP2_SCHPO (Casein kinase I homolog hhp2 OS=Schizosaccharomyces pombe GN=hhp2 PE=2 SV=2)

HSP 1 Score: 153.68 bits (387), Expect = 6.552e-37
Identity = 68/108 (62.96%), Postives = 87/108 (80.56%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQ 324
            QSRRDDLESLGYVLLYF RGSLPWQGL+A TK+QKY +I + K+ TP+EVLCK  P EF +Y  Y + L+F ++P+Y +L++LF DL  R+GY +D+VFDW ILKYQ+
Sbjct:  191 QSRRDDLESLGYVLLYFCRGSLPWQGLQADTKEQKYQRIRDTKIGTPLEVLCKGLPEEFITYMCYTRQLSFTEKPNYAYLRKLFRDLLIRKGYQYDYVFDWMILKYQK 298          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1A_DROME (Casein kinase I isoform alpha OS=Drosophila melanogaster GN=CkIalpha PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 8.557e-37
Identity = 67/110 (60.91%), Postives = 90/110 (81.82%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQ 330
            QSRRDD+ESLGYV++YF RG LPWQG+KA TK+QKY+KI EKK+STPIEVLCK  PAEF+ Y +YC+SL F+++PDY +L++LF  LF    + +D+++DWT+LK +  Q
Sbjct:  201 QSRRDDMESLGYVMMYFNRGVLPWQGMKANTKQQKYEKISEKKMSTPIEVLCKGSPAEFSMYLNYCRSLRFEEQPDYMYLRQLFRILFRTLNHQYDYIYDWTMLKQKTHQ 310          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1AL_HUMAN (Casein kinase I isoform alpha-like OS=Homo sapiens GN=CSNK1A1L PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 8.557e-37
Identity = 69/114 (60.53%), Postives = 88/114 (77.19%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKYQQTQKTKS 342
            QSRRDD+ESLGYV +YF R SLPWQGL+A TKKQKY+KI EKK+STP+EVLCK  PAEFA Y +YC+ L F++ PDY +L++LF  LF    + +D+ FDWT+LK +  Q+  S
Sbjct:  198 QSRRDDMESLGYVFMYFNRTSLPWQGLRAMTKKQKYEKISEKKMSTPVEVLCKGFPAEFAMYLNYCRGLRFEEVPDYMYLRQLFRILFRTLNHQYDYTFDWTMLKQKAAQQAAS 311          
The following BLAST results are available for this feature:
BLAST of FC925331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
KC1A_SHEEP2.037e-3863.16Casein kinase I isoform alpha OS=Ovis aries GN=CSN... [more]
KC1A_RAT2.037e-3863.16Casein kinase I isoform alpha OS=Rattus norvegicus... [more]
KC1A_RABIT2.037e-3863.16Casein kinase I isoform alpha OS=Oryctolagus cunic... [more]
KC1A_MOUSE2.037e-3863.16Casein kinase I isoform alpha OS=Mus musculus GN=C... [more]
KC1A_HUMAN2.037e-3863.16Casein kinase I isoform alpha OS=Homo sapiens GN=C... [more]
KC1A_CHICK2.037e-3863.16Casein kinase I isoform alpha OS=Gallus gallus GN=... [more]
KC1A_BOVIN2.037e-3863.16Casein kinase I isoform alpha OS=Bos taurus GN=CSN... [more]
HHP2_SCHPO6.552e-3762.96Casein kinase I homolog hhp2 OS=Schizosaccharomyce... [more]
KC1A_DROME8.557e-3760.91Casein kinase I isoform alpha OS=Drosophila melano... [more]
KC1AL_HUMAN8.557e-3760.53Casein kinase I isoform alpha-like OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YG07FM1 TF Citrus clementina cDNA clone KN0AAP3YG07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925331 ID=FC925331; Name=FC925331; organism=Citrus clementina; type=EST; length=596bp
CAAAGCCGTCGGGATGATTTAGAGTCTCTTGGCTATGTTCTGTTGTATTT
TTTACGAGGAAGCCTCCCTTGGCAGGGTCTAAAAGCTGCCACAAAAAAGC
AAAAGTATGACAAAATATGTGAGAAGAAGGTATCAACACCTATTGAGGTC
CTTTGCAAGTCTCATCCTGCGGAATTTGCATCTTATTTCCATTATTGCCA
ATCTTTAACCTTTGACCAGCGGCCTGATTATGGATTCTTGAAGCGTTTGT
TCCATGACTTGTTTTCTCGAGAAGGATATGATTTTGATTTTGTGTTTGAC
TGGACCATTCTCAAGTACCAGCAGACACAAAAGACGAAGTCACAGGATTT
GCTGCCAGCTTCTAGAGTGACTAACAGTCGGGTAATGCCAATGCGCACTG
ATAAGCTTAAAGGAGTCAATGACGCTTCTTGTTCAGCAGAGGTTCTGGAG
TGCAGAGGATCATATAATCGCACTCGCCCAGATGCAGATATGCAGCATAG
GCCATCAGTAGCTGAGAAAATGAGTTCTGATCATCAATTTGGGAAACATA
GTATGGGCAATGCATCAATTCCGTCTGCTTCAATTGTTCTGCCCCA
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