FC925331

Overview
NameFC925331
Unique NameFC925331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: CKI1_SCHPO (Casein kinase I homolog 1 OS=Schizosaccharomyces pombe GN=cki1 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 7.016e-31
Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTILKY-QQTQKTKSQDLLPASRVTNSRVMPMRTDKLKGVNDASCSAEVLECRGSYNRTRPDADMQHRPSVAE 516
            QSRRDDLE+LG+V +YFLRGSLPWQGLKAAT KQKY++I EKK STP+  LC   P EF  Y HY ++L FD  PDY +L+ LF  +  R     D  FDW +L   +  Q  KS++    ++ ++    P    K   + + + +  V+  R  Y +   +  +      AE
Sbjct:  195 QSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNLLNNGKGWQSLKSRNAETENQRSSKPPAPKLESKSPALQNHASTQNVVSKRSDYEKPFAEPHLNSASDSAE 367          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1G3_HUMAN (Casein kinase I isoform gamma-3 OS=Homo sapiens GN=CSNK1G3 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.041e-30
Identity = 60/101 (59.41%), Postives = 80/101 (79.21%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW 303
            QSRRDDLE+LG++ +YFLRGSLPWQGLKA T K++Y KI + K +TPIEVLC++ P E A+Y  Y + L F ++PDY +L++LF DLF R+GY FD+ +DW
Sbjct:  226 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDW 325          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: CKI2_SCHPO (Casein kinase I homolog 2 OS=Schizosaccharomyces pombe GN=cki2 PE=1 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 2.041e-30
Identity = 63/104 (60.58%), Postives = 73/104 (70.19%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTIL 312
            QSRRDDLESLG+V +YFLRGSLPWQGLKAA  K KY+KI EKK ST I  LC   P EF+ Y  Y +SL FD+ PDY FL+ LF D+    G   D V+DW +L
Sbjct:  195 QSRRDDLESLGHVFMYFLRGSLPWQGLKAANNKHKYEKISEKKQSTSISELCAGFPNEFSKYMTYVRSLEFDEEPDYAFLQELFDDVLRANGDTNDGVYDWMLL 298          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: CKI3_SCHPO (Casein kinase I homolog 3 OS=Schizosaccharomyces pombe GN=cki3 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.257e-29
Identity = 73/193 (37.82%), Postives = 103/193 (53.37%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTIL------------------KYQQTQKTKSQDLLPASRVTNSRVM--PMRTDKLKGVNDASCSAEVLECRGSYNRTRPDADMQHRPSVAEK 519
            QSRRDDLES+G+V +YFLRGSLPWQGLKAAT KQKY+KI EKK  TP++ LC+ +P EF  Y  Y ++L +++ PDY +L+ LF  L  R     D  +DWT+L                  ++ Q    + Q  +P    T   ++  P +   +  V DAS + +     G      P    Q + S A++
Sbjct:  198 QSRRDDLESMGHVFMYFLRGSLPWQGLKAATNKQKYEKIGEKKQVTPLKELCEGYPKEFLQYMIYARNLGYEEAPDYDYLRSLFDSLLLRINETDDGKYDWTLLNNGKGWQYSAAKQHVVQRRHTQGTNNRRQSTIPPYARTRQNLLSSPSKQTPVNNVVDASVATQKDGIPG--KAASPQVQQQQQTSSAQQ 388          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC11_ENCCU (Probable casein kinase I homolog ECU03_0910 OS=Encephalitozoon cuniculi GN=ECU03_0910 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.384e-23
Identity = 49/103 (47.57%), Postives = 68/103 (66.02%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDWTI 309
            QSRRDDLES+G+ ++YFL+G LPWQGLKA TK++KYD+I E K S  +  LC   P E  S+  Y ++L ++  P+Y +L+ L  D   + G   D VFDW +
Sbjct:  189 QSRRDDLESVGFCMVYFLKGRLPWQGLKAKTKQEKYDRIRESKESISLYELCMGLPKEIHSFCFYVRNLGYEDMPNYAYLRTLLSDALRQRGLRSDGVFDWMV 291          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC11_YEAST (Casein kinase I homolog 1 OS=Saccharomyces cerevisiae GN=YCK1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 6.582e-21
Identity = 49/101 (48.51%), Postives = 64/101 (63.37%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW 303
            QSRRDD+E+LG+V  YFLRG LPWQGLKA   KQKY+KI EKK ST +  L +  P +F  Y    +SL+F++ PDY   ++L   +    G   D  +DW
Sbjct:  252 QSRRDDMEALGHVFFYFLRGHLPWQGLKAPNNKQKYEKIGEKKRSTNVYDLAQGLPVQFGRYLEIVRSLSFEECPDYEGYRKLLLSVLDDLGETADGQYDW 352          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: RAG8_KLULA (Casein kinase I homolog RAG8 OS=Kluyveromyces lactis GN=RAG8 PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 8.596e-21
Identity = 48/101 (47.52%), Postives = 63/101 (62.38%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW 303
            QSRRDD+E+LG+V  YFLRG LPWQGLKAA  K KY+KI EKK ST +  L +  P +F  Y    ++L F++ PDY   ++L   +    G   D  +DW
Sbjct:  260 QSRRDDMEALGHVFFYFLRGQLPWQGLKAANNKLKYEKIGEKKRSTNVYDLSQGLPVQFGRYLEIVRNLGFEETPDYEGYRKLLLSVLDELGQKLDGEYDW 360          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC13_YEAST (Casein kinase I homolog 3 OS=Saccharomyces cerevisiae GN=YCK3 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 4.266e-20
Identity = 51/103 (49.51%), Postives = 65/103 (63.11%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKI--CEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW 303
            QSRRDDLESLG+V  YFLRGSLPWQGLKA   K KY+KI   ++K++    +L  + P +FA+Y  Y +SL FD+ PDY +L  L  D         D  +DW
Sbjct:  230 QSRRDDLESLGHVFFYFLRGSLPWQGLKAPNNKLKYEKIGMTKQKLNPDDLLLNNAIPYQFATYLKYARSLKFDEDPDYDYLISLMDDALRLNDLKDDGHYDW 332          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC12_YEAST (Casein kinase I homolog 2 OS=Saccharomyces cerevisiae GN=YCK2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.621e-19
Identity = 46/101 (45.54%), Postives = 62/101 (61.39%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW 303
            QSRRDD+E++G+V  YFLRG LPWQGLKA   KQKY+KI EKK  T +  L +  P +F  Y    ++L+F++ PDY   + L   +    G   D  +DW
Sbjct:  259 QSRRDDMEAMGHVFFYFLRGQLPWQGLKAPNNKQKYEKIGEKKRLTNVYDLAQGLPIQFGRYLEIVRNLSFEETPDYEGYRMLLLSVLDDLGETADGQYDW 359          
BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: KC1G3_BOVIN (Casein kinase I isoform gamma-3 (Fragment) OS=Bos taurus GN=CSNK1G3 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.982e-17
Identity = 42/65 (64.62%), Postives = 53/65 (81.54%), Query Frame = 1
Query:    1 QSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHY 195
            QSRRDDLE+LG++ +YFLRGSLPWQGLKA T K++Y KI + K +TPIEVLC++ P E A+Y  Y
Sbjct:  212 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRY 275          
The following BLAST results are available for this feature:
BLAST of FC925331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CKI1_SCHPO7.016e-3141.04Casein kinase I homolog 1 OS=Schizosaccharomyces p... [more]
KC1G3_HUMAN2.041e-3059.41Casein kinase I isoform gamma-3 OS=Homo sapiens GN... [more]
CKI2_SCHPO2.041e-3060.58Casein kinase I homolog 2 OS=Schizosaccharomyces p... [more]
CKI3_SCHPO2.257e-2937.82Casein kinase I homolog 3 OS=Schizosaccharomyces p... [more]
KC11_ENCCU5.384e-2347.57Probable casein kinase I homolog ECU03_0910 OS=Enc... [more]
KC11_YEAST6.582e-2148.51Casein kinase I homolog 1 OS=Saccharomyces cerevis... [more]
RAG8_KLULA8.596e-2147.52Casein kinase I homolog RAG8 OS=Kluyveromyces lact... [more]
KC13_YEAST4.266e-2049.51Casein kinase I homolog 3 OS=Saccharomyces cerevis... [more]
KC12_YEAST1.621e-1945.54Casein kinase I homolog 2 OS=Saccharomyces cerevis... [more]
KC1G3_BOVIN1.982e-1764.62Casein kinase I isoform gamma-3 (Fragment) OS=Bos ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP3YG07FM1 TF Citrus clementina cDNA clone KN0AAP3YG07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925331 ID=FC925331; Name=FC925331; organism=Citrus clementina; type=EST; length=596bp
CAAAGCCGTCGGGATGATTTAGAGTCTCTTGGCTATGTTCTGTTGTATTT
TTTACGAGGAAGCCTCCCTTGGCAGGGTCTAAAAGCTGCCACAAAAAAGC
AAAAGTATGACAAAATATGTGAGAAGAAGGTATCAACACCTATTGAGGTC
CTTTGCAAGTCTCATCCTGCGGAATTTGCATCTTATTTCCATTATTGCCA
ATCTTTAACCTTTGACCAGCGGCCTGATTATGGATTCTTGAAGCGTTTGT
TCCATGACTTGTTTTCTCGAGAAGGATATGATTTTGATTTTGTGTTTGAC
TGGACCATTCTCAAGTACCAGCAGACACAAAAGACGAAGTCACAGGATTT
GCTGCCAGCTTCTAGAGTGACTAACAGTCGGGTAATGCCAATGCGCACTG
ATAAGCTTAAAGGAGTCAATGACGCTTCTTGTTCAGCAGAGGTTCTGGAG
TGCAGAGGATCATATAATCGCACTCGCCCAGATGCAGATATGCAGCATAG
GCCATCAGTAGCTGAGAAAATGAGTTCTGATCATCAATTTGGGAAACATA
GTATGGGCAATGCATCAATTCCGTCTGCTTCAATTGTTCTGCCCCA
back to top