FC925331

Overview
NameFC925331
Unique NameFC925331
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC925331 vs. ExPASy Swiss-Prot
Match: Y2354_DICDI (Probable serine/threonine-protein kinase DDB_G0292354 OS=Dictyostelium discoideum GN=DDB_G0292354 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.276e-12
Identity = 53/194 (27.32%), Postives = 83/194 (42.78%), Query Frame = 1 
Query:    7 RRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICEKKVSTPIEVLCKSHPAEFASYFHYCQSLTFDQRPDYGFLKRLFHDLFSREGYDFDFVFDW--------------TILKYQQTQKTKSQDLLPASRVTNSRVMPMRTDKLKGVNDASCSAEVLECRGSYNRTR----PDADMQHRPSVAEKMSSDH 534
            RRDDL S+ YVL+ F  G LPW+ LK        D+I E K       L K  P +F+ +  + +SL ++ RP+Y FL+ L +D ++  G      FDW              T  + QQ Q+ + Q  L  S + NS    M +     V  +  S ++     + N        + D   +P +  + S  +
Sbjct:  200 RRDDLWSIFYVLIEFAEGQLPWRKLKDK------DQIGEMKQKYNTPDLVKDLPPQFSQFMKHLKSLNYEDRPNYVFLQTLLNDCYTSLGLSESTPFDWEVQTNSGASSSSSNTTQQQQQQQQQQQQRNLNQSGLNNSSARLMASPSTIDVEASGKSTQLNNSNNNNNNNNKGLGAENDSSPQPQIIRRNSESN 387
The following BLAST results are available for this feature:
BLAST of FC925331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
Y2354_DICDI4.276e-1227.32Probable serine/threonine-protein kinase DDB_G0292... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YG07FM1 TF Citrus clementina cDNA clone KN0AAP3YG07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925331 ID=FC925331; Name=FC925331; organism=Citrus clementina; type=EST; length=596bp
CAAAGCCGTCGGGATGATTTAGAGTCTCTTGGCTATGTTCTGTTGTATTT
TTTACGAGGAAGCCTCCCTTGGCAGGGTCTAAAAGCTGCCACAAAAAAGC
AAAAGTATGACAAAATATGTGAGAAGAAGGTATCAACACCTATTGAGGTC
CTTTGCAAGTCTCATCCTGCGGAATTTGCATCTTATTTCCATTATTGCCA
ATCTTTAACCTTTGACCAGCGGCCTGATTATGGATTCTTGAAGCGTTTGT
TCCATGACTTGTTTTCTCGAGAAGGATATGATTTTGATTTTGTGTTTGAC
TGGACCATTCTCAAGTACCAGCAGACACAAAAGACGAAGTCACAGGATTT
GCTGCCAGCTTCTAGAGTGACTAACAGTCGGGTAATGCCAATGCGCACTG
ATAAGCTTAAAGGAGTCAATGACGCTTCTTGTTCAGCAGAGGTTCTGGAG
TGCAGAGGATCATATAATCGCACTCGCCCAGATGCAGATATGCAGCATAG
GCCATCAGTAGCTGAGAAAATGAGTTCTGATCATCAATTTGGGAAACATA
GTATGGGCAATGCATCAATTCCGTCTGCTTCAATTGTTCTGCCCCA
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