FC925337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_ECOLC (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=fadJ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.903e-17 Identity = 63/213 (29.58%), Postives = 101/213 (47.42%), Query Frame = 3 Query: 66 APRVTMEVGNDGVAIITLINPP--VNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635 A T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F G DIN+ A + P+ + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+ A+++ + +P R L Sbjct: 4 ASAFTLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELVKQDRPSSRPL 212
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: ECHM_DICDI (Probable enoyl-CoA hydratase, mitochondrial OS=Dictyostelium discoideum GN=echs1 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.485e-17 Identity = 62/185 (33.51%), Postives = 89/185 (48.11%), Query Frame = 3 Query: 102 VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGADC---------------KKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAA 608 V ++TL P +NAL+ +++ + + DV +I++TG+ F+ G DI +KV D +KPI M C IA K G PE+ LG IPG GGTQRL R +G SKA+E++L ++T+ E K GL+ VV EELL + A IA+ Sbjct: 34 VGLVTLNRPKSLNALSDGLISEINSAVKLFQEDKDVGSIIITGSEKAFAAGADIKEMEKVTLPDAYNNDLLAQWHDLTKIRKPIIAAVNGYALGGGCELAMMCDIIIAGEKAVFGQPEIKLGTIPGCGGTQRLIRAIGKSKAMELVLTGNNLTAVEAEKAGLVSKVVPVEELLTEATKMAEKIAS 218
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_SHEHH (Fatty acid oxidation complex subunit alpha OS=Shewanella halifaxensis (strain HAW-EB4) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.245e-17 Identity = 60/191 (31.41%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 93 NDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKVHGA-DCKK-----------------PIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWAL 596 +DG+AI+T+ P +N L + D E + +K +VL +G F G DI++ A D K+ P+ + CH R+ + PKT +G+PE+ LG++PG GGTQRLPRLVG++ A++MML K + ++ K+GL+D V LL+ + AL Sbjct: 13 DDGIAILTMDVPGETMNTLRSEFGPEISDVLAEIKADTSIKGLVLVSGKKDSFVAGADISMLDACETATDAKQLSQQGHVVFNELESLPIPVVAAINGACLGGGLELALACHKRVCSLNPKTMMGVPEVQLGLLPGGGGTQRLPRLVGVTTALDMMLTGKQLRPKQALKMGLVDDAVPESILLRTAVEMAL 203
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_ECOLI (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain K12) GN=fadJ PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17 Identity = 61/211 (28.91%), Postives = 102/211 (48.34%), Query Frame = 3 Query: 78 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVF--------------------QKVHGADCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635 T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F G DIN+ ++H + + + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+ A+++A + +P R L Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIQ--VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPL 212
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_ECODH (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain K12 / DH10B) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17 Identity = 61/211 (28.91%), Postives = 102/211 (48.34%), Query Frame = 3 Query: 78 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVF--------------------QKVHGADCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635 T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F G DIN+ ++H + + + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+ A+++A + +P R L Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIQ--VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPL 212
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_ECOBW (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain K12 / BW2952) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17 Identity = 61/211 (28.91%), Postives = 102/211 (48.34%), Query Frame = 3 Query: 78 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVF--------------------QKVHGADCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635 T+ V D +A+IT+ P +N L + ++ ++ +++ +V ++ F G DIN+ ++H + + + CH R+ PKT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+ A+++A + +P R L Sbjct: 8 TLNVRLDNIAVITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQGQQLMAEIHALPIQ--VIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKKERPSSRPL 212
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_ECO7I (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.239e-17 Identity = 63/213 (29.58%), Postives = 101/213 (47.42%), Query Frame = 3 Query: 66 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635 A T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F G DIN+ A + P+ + CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+ A+++A + +P R L Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFISAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPL 212
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_SHESW (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain W3-18-1) GN=fadJ PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.536e-17 Identity = 64/204 (31.37%), Postives = 97/204 (47.55%), Query Frame = 3 Query: 93 NDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635 +DG+AI+T+ P +N L + + E S ++ +VL +G F G DI++ A K P+ + CH R+ + KT LG+PE+ LG++PG GGTQRLPRLVG++ A++MML K I S++ K+GL++ VV LL+ + AL KP +SL Sbjct: 11 DDGIAILTMDVPGETMNTLKAQFGPEISEILAEIKSDPHIRGLVLISGKKDSFVAGADISMLDACKTAGDAKALSQQGHVVFNELEALKIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRSKQALKMGLVNDVVPQTILLQTAVEMALTGKRAPKPVKKSL 214
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_ECOSM (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fadJ PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 5.536e-17 Identity = 63/213 (29.58%), Postives = 101/213 (47.42%), Query Frame = 3 Query: 66 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635 A T+ V D +AIIT+ P +N L + ++ ++ +++ +V ++ F G DIN+ A + P+ + CH R+ KT LGLPE+ LG++PG GGTQRLPRL+G+S A+EM+L K + +++ KLGL+D VV LL+ A+++A + +P R L Sbjct: 4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEVLARQGQQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPQSILLEA----AVELAKQDRPSSRPL 212
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_KLEP3 (Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae (strain 342) GN=fadJ PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 7.230e-17 Identity = 61/210 (29.05%), Postives = 99/210 (47.14%), Query Frame = 3 Query: 81 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDIN--------------------VFQKVHGADCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635 +EV D +A+IT+ P +N L ++ + V+ +V ++ F G DIN + ++HG P+ + CH RI + KT+LGLPE+ LG++PG GGTQRLPRL+G+S A++MML + + + + K GL+D VV LL+ A+++A + +P R + Sbjct: 9 LEVRADKIAVITIDAPGEKMNTLKAEFGNQVRGLIRQVRDDKSVRGVVFISAKTDNFIAGADINMIARCRSAQEAEALARQGQQIMAEIHGLSI--PVIAAIHGACLGGGLELALACHGRICSDDEKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSTALDMMLTGRQLRARQALKAGLVDEVVPQAILLQA----AVELALKGRPASRDM 212 The following BLAST results are available for this feature:
BLAST of FC925337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925337 ID=FC925337; Name=FC925337; organism=Citrus clementina; type=EST; length=672bpback to top |