FC925337

Overview
NameFC925337
Unique NameFC925337
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length672
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_ESCF3 (Fatty acid oxidation complex subunit alpha OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=fadJ PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.230e-17
Identity = 63/209 (30.14%), Postives = 97/209 (46.41%), Query Frame = 3
Query:   78 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGA------------------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635
            T+ V  D +A++T+  P   +N L     A ++   +E     +++ +V ++     F  G DIN+    + A                      P+                + CH RI    PKT LGLPE+ LG++PG GGTQRLPRLVGLS A++M+L  K +   +  K GL+D +V    LL+     A++ A + +   RSL
Sbjct:    8 TLNVRLDHIAVVTIDVPGEKMNTLKAEFAAQVRAILKEIRENKEIRGVVFISAKADNFIAGADINMIDHCNTAMEAETLARQGQQLMAEIHALPVPVIAAIHGACLGGGLELALACHGRICTDDPKTILGLPEVQLGLLPGSGGTQRLPRLVGLSTALDMILTGKQLRPGQALKSGLVDEIVPQSILLQA----AVERAKQERQTPRSL 212          
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_SHEB8 (Fatty acid oxidation complex subunit alpha OS=Shewanella baltica (strain OS185) GN=fadJ PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16
Identity = 63/204 (30.88%), Postives = 96/204 (47.06%), Query Frame = 3
Query:   93 NDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635
            +DG+AI+T+  P   +N L       + +   E  S   ++ +VL +G    F  G DI++      A   K                  P+                + CH R+ +   KT LG+PE+ LG++PG GGTQRLPRLVG++ A++MML  K I  ++  K+GL++ VV    LL+ +   AL      KP  +SL
Sbjct:   11 DDGIAILTMDVPGETMNTLKAQFGPEISEILAEIKSDSSIRGLVLISGKKDSFVAGADISMLDACKTAGDAKALSQQGHVVFNELEALTIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKKIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPVKKSL 214          
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_PHOLL (Fatty acid oxidation complex subunit alpha OS=Photorhabdus luminescens subsp. laumondii GN=fadJ PE=3 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.611e-16
Identity = 59/191 (30.89%), Postives = 96/191 (50.26%), Query Frame = 3
Query:   78 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVF----------------QKVHG--ADCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVS 581
            + +V  D + IIT+  P   VN L    V    + F++A     +K ++L +G    F  G DI++                 QK+    A+   P+                + CH R+ +   KT+LGLPE+ LG++PG GGTQRLPRL+G+S A+++ML  K + +++  +LGL+D  V  + LL ++
Sbjct:   23 SFDVRPDKIGIITINVPGEKVNTLKAEFVDQFLNVFKQAQQSSGLKGLILISGKPDTFIAGADISMIAGCKTKEDARDLAEKGQKLFSQIANYPLPVVAAIHGACLGGGLELALACHWRVCSQDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVSSALDIMLTGKQLRAKQALRLGLVDDAVPLDILLDIA 213          
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_ENT38 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sp. (strain 638) GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 59/211 (27.96%), Postives = 98/211 (46.45%), Query Frame = 3
Query:   78 TMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDIN--------------------VFQKVHGADCKKPIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635
            T+ V  D +A++T+  P   +N L       ++   ++     +++ ++ ++     F  G DIN                    +  ++HG     P+                + CH+R+     KT LGLPE+ LG++PG GGTQRLPRLVG+S A+EM+L  K +   +  K+GL+D VV    LL      A+++A + +   R L
Sbjct:    8 TLNVRLDNIAVVTIDVPGEKMNTLKAEFGVQVRSILKQVRDNKNIRGLIFISAKSDNFIAGADINMIARAKSAQEAEELARQGQQIMAEIHGLSI--PVIAAIHGACLGGGLELALACHSRVCTDDAKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALEMILTGKQLRPRQALKVGLVDEVVPHSILLTA----AVELAQKERQASRHL 212          
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_ENTS8 (Fatty acid oxidation complex subunit alpha OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=fadB PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.104e-16
Identity = 66/208 (31.73%), Postives = 94/208 (45.19%), Query Frame = 3
Query:   96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSL 635
            DG+A +    P  VN L    VA L    +    + D+KA++L      F  G DI  F            Q +H A        D   P                 +    R+A P  ++GLPE  LG++PGFGG+ RLPRL+G   A+E++   K IT++   K+GL+DAVV  E+L       L+ +    LD  ARR+P +  L
Sbjct:   15 DGIAELVFDAPGSVNKLDTATVASLGHALDVLEKQHDLKALLLRSEKAAFIVGADITEFLSLFQVPAEQLSQWLHFANSVFNRLEDLPVPTLCAINGYALGGGCECVLATDFRLATPDARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDITADAALKVGLVDAVVKPEKLIEGALRMLRQAIDGELDWQARRQPKLEPL 222          
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_SHIDS (Fatty acid oxidation complex subunit alpha OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 62/213 (29.11%), Postives = 100/213 (46.95%), Query Frame = 3
Query:   66 APRVTMEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAA--PKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635
            A   T+ V  D +AIIT+  P   +N L     + ++   ++     +++ +V ++     F  G DIN+      A   +                  P+                + CH R+    PKT L LPE+ LG++PG  GTQRLPRL+G+S A+EM+L  K + +++  KLGL+D VV    LL+     A+++A + +P  R L
Sbjct:    4 ASAFTLNVRLDNIAIITIDVPGEKMNTLKAEFASQVRAIIKQLRENKELRGVVFVSAKPDNFIAGADINMIGNCKTAQEAEALARQDQQLMAEIHALPIPVIAAIHGACLGGGLELALACHGRVCTDDPKTVLSLPEVQLGLLPGSDGTQRLPRLIGVSTALEMILTGKQLRAKQALKLGLVDDVVPHSILLEA----AVELAKQDRPSSRPL 212          
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_SHEPC (Fatty acid oxidation complex subunit alpha OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 63/204 (30.88%), Postives = 96/204 (47.06%), Query Frame = 3
Query:   93 NDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635
            +DG+AI+T+  P   +N L       + +   E  S   ++ +VL +G    F  G DI++      A   K                  P+                + CH R+ +   KT LG+PE+ LG++PG GGTQRLPRLVG++ A++MML  K I  ++  K+GL++ VV    LL+ +   AL      KP  +SL
Sbjct:   11 DDGIAILTMDVPGETMNTLKAQFGPEISEILAEIKSDPHIRGLVLISGKKDSFVAGADISMLDACKTAGDAKALSQQGHVVFNELEALKIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRAPKPIKKSL 214          
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: ECHM_MOUSE (Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.747e-16
Identity = 63/191 (32.98%), Postives = 84/191 (43.98%), Query Frame = 3
Query:   93 NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGADC---------------KKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK 617
            N  V +I L  P  +NAL   ++  L    E       V AIVLTG    F+ G DI   Q     DC               KKP+                M C    A  K Q G PE+ LG IPG GGTQRL R VG S A+EM+L    I++++  + GL+  +   E+L++ +   A  IA+  K
Sbjct:   44 NSSVGLIQLNRPKALNALCNGLIEELNQALETFEQDPAVGAIVLTGGDKAFAAGADIKEMQNRTFQDCYSSKFLSHWDHITRVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVEKLVEEAIQCAEKIASNSK 234          
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_SHESR (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-7) GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 62/203 (30.54%), Postives = 94/203 (46.31%), Query Frame = 3
Query:   96 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635
            DG+AI+T+  P   +N L       + +   E      ++ +VL +G    F  G DI++      A   K                  P+                + CH R+ +   KT LG+PE+ LG++PG GGTQRLPRLVG++ A++MML  K I  ++  K+GL++ VV    LL+ +   AL      KP  +SL
Sbjct:   12 DGIAILTMDVPGETMNTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSL 214          
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_SHESM (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain MR-4) GN=fadJ PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.588e-16
Identity = 62/203 (30.54%), Postives = 94/203 (46.31%), Query Frame = 3
Query:   96 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635
            DG+AI+T+  P   +N L       + +   E      ++ +VL +G    F  G DI++      A   K                  P+                + CH R+ +   KT LG+PE+ LG++PG GGTQRLPRLVG++ A++MML  K I  ++  K+GL++ VV    LL+ +   AL      KP  +SL
Sbjct:   12 DGIAILTMDVPGETMNTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSL 214          
The following BLAST results are available for this feature:
BLAST of FC925337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
FADJ_ESCF37.230e-1730.14Fatty acid oxidation complex subunit alpha OS=Esch... [more]
FADJ_SHEB81.611e-1630.88Fatty acid oxidation complex subunit alpha OS=Shew... [more]
FADJ_PHOLL1.611e-1630.89Fatty acid oxidation complex subunit alpha OS=Phot... [more]
FADJ_ENT382.104e-1627.96Fatty acid oxidation complex subunit alpha OS=Ente... [more]
FADB_ENTS82.104e-1631.73Fatty acid oxidation complex subunit alpha OS=Ente... [more]
FADJ_SHIDS2.747e-1629.11Fatty acid oxidation complex subunit alpha OS=Shig... [more]
FADJ_SHEPC2.747e-1630.88Fatty acid oxidation complex subunit alpha OS=Shew... [more]
ECHM_MOUSE2.747e-1632.98Enoyl-CoA hydratase, mitochondrial OS=Mus musculus... [more]
FADJ_SHESR3.588e-1630.54Fatty acid oxidation complex subunit alpha OS=Shew... [more]
FADJ_SHESM3.588e-1630.54Fatty acid oxidation complex subunit alpha OS=Shew... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YH20FM1 TF Citrus clementina cDNA clone KN0AAP8YH20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925337 ID=FC925337; Name=FC925337; organism=Citrus clementina; type=EST; length=672bp
TTCGGATTGATATTAAAATCTCCACTAAAAGAAATAATTGATAATAATAA
CAGTAAGCCATGGCAGCACCGCGAGTGACGATGGAAGTCGGAAACGACGG
CGTTGCGATCATCACTTTGATTAATCCTCCCGTGAACGCCTTAGCTATTC
CAATTGTTGCCGGATTGAAGGACAAGTTTGAGGAGGCCACGAGCCGAGAC
GACGTTAAGGCTATTGTTCTGACTGGCAATGGTGGAAGGTTTTCTGGCGG
TTTCGACATAAATGTTTTTCAGAAGGTTCACGGGGCTGATTGCAAGAAGC
CCATTGTTGCAGCTGTGGAGGGGTTAGCCCTTGGAGGTGGCTTAGAATTG
GCAATGGGATGCCATGCACGTATTGCTGCTCCAAAGACTCAACTTGGCTT
GCCTGAGCTGACACTAGGGGTAATTCCAGGTTTTGGAGGCACACAACGTC
TACCAAGGCTGGTGGGCCTCTCAAAGGCTATTGAAATGATGCTGTTATCT
AAATCAATCACGTCTGAGGAGGGCTGGAAGCTGGGTCTAATTGATGCTGT
TGTGACTTCTGAAGAGTTGCTGAAAGTATCTCGACTCTGGGCTTTAGACA
TTGCAGCAAGGCGCAAACCATGGATACGTTCCCTTCACAGGACAGACAAA
CTTGGTTCTCTTTCTGAAGCAA
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