FC925337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_SALPA (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A GN=fadB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16 Identity = 63/208 (30.29%), Postives = 92/208 (44.23%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSL 635 DG+A + P VN L VA L E + D+K ++L N F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ RLPR++G A+E++ K + +E K+GL+D VV E+L L+ + LD A+R+P + L Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHALKIGLVDGVVKQEKLIEGAIAVLRQAITGDLDWRAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_SALG2 (Fatty acid oxidation complex subunit alpha OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=fadB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16 Identity = 63/208 (30.29%), Postives = 92/208 (44.23%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSL 635 DG+A + P VN L VA L E + D+K ++L N F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ RLPR++G A+E++ K + +E K+GL+D VV E+L L+ + LD A+R+P + L Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHALKIGLVDGVVKQEKLIEGAIAVLRQAITGDLDWRAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_SALEP (Fatty acid oxidation complex subunit alpha OS=Salmonella enteritidis PT4 (strain P125109) GN=fadB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16 Identity = 63/208 (30.29%), Postives = 92/208 (44.23%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSL 635 DG+A + P VN L VA L E + D+K ++L N F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ RLPR++G A+E++ K + +E K+GL+D VV E+L L+ + LD A+R+P + L Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHALKIGLVDGVVKQEKLIEGAIAVLRQAITGDLDWRAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_SALCH (Fatty acid oxidation complex subunit alpha OS=Salmonella choleraesuis GN=fadB PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16 Identity = 63/208 (30.29%), Postives = 92/208 (44.23%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSL 635 DG+A + P VN L VA L E + D+K ++L N F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ RLPR++G A+E++ K + +E K+GL+D VV E+L L+ + LD A+R+P + L Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHALKIGLVDGVVKQEKLIEGAIAVLRQAITGDLDWRAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_SALA4 (Fatty acid oxidation complex subunit alpha OS=Salmonella agona (strain SL483) GN=fadB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.121e-16 Identity = 63/208 (30.29%), Postives = 92/208 (44.23%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSL 635 DG+A + P VN L VA L E + D+K ++L N F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ RLPR++G A+E++ K + +E K+GL+D VV E+L L+ + LD A+R+P + L Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHALKIGLVDGVVKQEKLIEGAIAVLRQAITGDLDWRAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_SALNS (Fatty acid oxidation complex subunit alpha OS=Salmonella newport (strain SL254) GN=fadB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.044e-15 Identity = 63/208 (30.29%), Postives = 91/208 (43.75%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSL 635 DG+A + P VN L VA L E + D+K ++L N F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ RLPR++G A+E++ K + +E K+GL+D VV E L L+ + LD A+R+P + L Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGQALEVLEKQHDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRMLGADSALEIIAAGKDVGAEHALKIGLVDGVVKQETLIEGAIAVLRQAITGDLDWRAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_PHOPR (Fatty acid oxidation complex subunit alpha OS=Photobacterium profundum GN=fadJ PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.364e-15 Identity = 58/203 (28.57%), Postives = 97/203 (47.78%), Query Frame = 3 Query: 78 TMEVGNDGVAI--ITLINPPVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKVHGADCKKP------------------IXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK 617 ++ G++GVA I + N +N L V + D + + D+K +V+ +G F G DI + AD + + + CH+R+ + KT+LGLPE+ LG++PG GGTQRLPRL+G++ A++M+L K + +++ LGL++ V LL ++ AL +RK Sbjct: 15 SLTFGDNGVAWLKIDVPNERMNTLQSAFVDQVTDVLAQLKDKKDIKGMVVYSGKPDNFIAGADIRMLAACQTADEAQQLAAKGQELFGQLEALPFHVVAAIHGPCLGGGLELALACHSRVCSDDDKTRLGLPEVQLGLLPGSGGTQRLPRLIGVANALDMILTGKQLRAKKAKNLGLVEEAVPLSILLDIAEKQALKGKPKRK 217
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: ECHM_RAT (Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1 PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.364e-15 Identity = 63/191 (32.98%), Postives = 82/191 (42.93%), Query Frame = 3 Query: 93 NDGVAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGADC---------------KKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRK 617 N V +I L P +NAL ++ L E V AIVLTG F+ G DI Q DC KKP+ M C A K Q G PE+ LG IPG GGTQRL R VG S A+EM+L I++++ + GL+ + E L++ + A IA K Sbjct: 44 NSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQCAEKIANNSK 234
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_SHESA (Fatty acid oxidation complex subunit alpha OS=Shewanella sp. (strain ANA-3) GN=fadJ PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.781e-15 Identity = 61/203 (30.05%), Postives = 93/203 (45.81%), Query Frame = 3 Query: 96 DGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635 DG+AI+ + P +N L + + E ++ +VL +G F G DI++ A K P+ + CH R+ + KT LG+PE+ LG++PG GGTQRLPRLVG++ A++MML K I ++ K+GL++ VV LL+ + AL KP +SL Sbjct: 12 DGIAILMMDVPGETMNTLKAEFGPEISEILSEIKRDSSIRGLVLISGKKDSFVAGADISMLDACQTAGDAKALSQQGHVVFNELEALNIPVVAAIHGACLGGGLELALACHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKMGLVNDVVPQTILLQTAVEMALAGKRTAKPVKKSL 214
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_SHELP (Fatty acid oxidation complex subunit alpha OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadJ PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.781e-15 Identity = 55/191 (28.80%), Postives = 93/191 (48.69%), Query Frame = 3 Query: 93 NDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIVL-TGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWAL 596 ++G+A++T+ P +N L + + E + ++ +V+ +G F G DI++ A+ + P+ + CH R+ KT LGLPE+ LG++PG GGTQRLPRLVG++K+++MML K + +++ K+GL+D VV LL+ + AL Sbjct: 11 DNGIAVLTMDVPGETMNTLRAEFGPEICEMLAEIKADAGIRGVVIISGKKDSFVAGADISMLDACATAEDARELSKQGHEVFFALESLSIPVVAAINGACLGGGLELALACHQRVCTDSNKTMLGLPEVQLGLLPGGGGTQRLPRLVGIAKSLDMMLTGKQLRAKQALKMGLVDDVVPESILLQTAIEMAL 201 The following BLAST results are available for this feature:
BLAST of FC925337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925337 ID=FC925337; Name=FC925337; organism=Citrus clementina; type=EST; length=672bpback to top |