FC925337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_ECOBW (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain K12 / BW2952) GN=fadB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 59/208 (28.37%), Postives = 95/208 (45.67%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL-------WALDIAARRKPWIRSL 635 DG+A + P VN L VA L + + D+K ++L N F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ R+PR++G A+E++ K + +++ K+GL+D VV +E+L++ ++ LD A+R+P + L Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_ECO8A (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O8 (strain IAI1) GN=fadB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 59/208 (28.37%), Postives = 95/208 (45.67%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL-------WALDIAARRKPWIRSL 635 DG+A + P VN L VA L + + D+K ++L N F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ R+PR++G A+E++ K + +++ K+GL+D VV +E+L++ ++ LD A+R+P + L Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_ECO55 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain 55989 / EAEC) GN=fadB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 59/208 (28.37%), Postives = 95/208 (45.67%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRL-------WALDIAARRKPWIRSL 635 DG+A + P VN L VA L + + D+K ++L N F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ R+PR++G A+E++ K + +++ K+GL+D VV +E+L++ ++ LD A+R+P + L Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAKAVLRQAINGDLDWKAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_ECO45 (Fatty acid oxidation complex subunit alpha OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=fadB PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.038e-15 Identity = 60/208 (28.85%), Postives = 94/208 (45.19%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSL 635 DG+A + P VN L VA L + + D+K ++L N F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ R+PR++G A+E++ K + +++ K+GL+D VV +E+L L+ + LD A+R+P + L Sbjct: 15 DGIAELVFDTPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAIAILRQAINGDLDWKAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_SALPK (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A (strain AKU_12601) GN=fadJ PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 60/208 (28.85%), Postives = 96/208 (46.15%), Query Frame = 3 Query: 81 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635 + V D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+ A + P+ + CH RI KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L+ K + + + K GL+D VV LL+ A+++A + + R+L Sbjct: 9 LNVRLDNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINIIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTL 212
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADJ_SALPA (Fatty acid oxidation complex subunit alpha OS=Salmonella paratyphi A GN=fadJ PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 60/208 (28.85%), Postives = 96/208 (46.15%), Query Frame = 3 Query: 81 MEVGNDGVAIITLINP--PVNALAIPIVAGLKDKFEEATSRDDVKAIV-LTGNGGRFSGGFDINVFQKVHGADCKK------------------PIXXXXXXXXXXXXXXXXMGCHARIAAP--KTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSL 635 + V D VA++ + P VN L A ++ ++ ++ +V ++ F G DIN+ A + P+ + CH RI KT LGLPE+ LG++PG GGTQRLPRLVG+S A++M+L+ K + + + K GL+D VV LL+ A+++A + + R+L Sbjct: 9 LNVRLDNVAVVAIDVPGEKVNTLKAEFAAQVRAILKQIRENKALQGVVFISAKADNFIAGADINIIGHCQNAQEAETLARQGQQLMAEIQALPVPVIAAIHGACLGGGLEMALACHRRICTDDVKTVLGLPEVQLGLLPGSGGTQRLPRLVGVSTALDMILIGKQLRARQALKAGLVDDVVPQTILLEA----AVELAKKERLAQRTL 212
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_KLEP3 (Fatty acid oxidation complex subunit alpha OS=Klebsiella pneumoniae (strain 342) GN=fadB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 61/208 (29.33%), Postives = 94/208 (45.19%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSL 635 DG+A + P VN L VA L + ++D+K ++L F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ RLPRL+G A+E++ K + +++ K+GL+D VV +E+L L+ + LD A+R+P + L Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGHALDVLEKQNDLKGLLLRSEKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTISAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDVGADQALKIGLVDGVVAAEKLRDGALAILRQAINGDLDWKAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_ECOSM (Fatty acid oxidation complex subunit alpha OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=fadB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 61/218 (27.98%), Postives = 99/218 (45.41%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSLHRTDKLGSLS 665 DG+A + P VN L VA L + + D+K ++L N F G DI F Q +H A D P + R+A P ++GLPE LG++PGFGG+ R+PR++G A+E++ K + +++ K+GL+D VV +E+L L+ + LD A+R+P + L ++ ++S Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLIEGAMAILRQAINGDLDWKAKRQPKLEPLKLSEIEATMS 232
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: FADB_CITK8 (Fatty acid oxidation complex subunit alpha OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=fadB PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 61/208 (29.33%), Postives = 93/208 (44.71%), Query Frame = 3 Query: 96 DGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVF------------QKVHGA--------DCKKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSL 635 DG+A + P VN L VA L + + D+K ++L N F G DI F Q +H A D P + R+ P ++GLPE LG++PGFGG+ R+PR++G A+E++ K I +E+ K+GL+D VV E+L L+ + +LD A+R+P + L Sbjct: 15 DGIAELVFDAPGSVNKLDTATVASLGQALDVLEKQTDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTLSAINGYALGGGCECVLATDYRLVTPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDIGAEQALKIGLVDGVVKPEKLLDGAIAVLRQAIDGSLDWKAKRQPKLEPL 222
BLAST of FC925337 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCTU (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis GN=echA8 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.967e-15 Identity = 55/184 (29.89%), Postives = 87/184 (47.28%), Query Frame = 3 Query: 102 VAIITLINPP-VNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGADC---------------KKPIXXXXXXXXXXXXXXXXMGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIA 605 V IITL P +NAL ++ + E D+ AI++TG+ F+ G DI + AD + P M C IAA + G PE+ LGV+PG GG+QRL R +G +KA++++L +++ + E + GL+ VV +++LL +R A I+ Sbjct: 14 VGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRVVPADDLLTEARATATTIS 197 The following BLAST results are available for this feature:
BLAST of FC925337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925337 ID=FC925337; Name=FC925337; organism=Citrus clementina; type=EST; length=672bpback to top |