FC925341

Overview
NameFC925341
Unique NameFC925341
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length659
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig7036 contig Ccv1_Contig7036:106..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADHH_GADMO (Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.635e-66
Identity = 120/208 (57.69%), Postives = 152/208 (73.08%), Query Frame = 2
Query:   32 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAA 655
            TAGQVI+CKAAVAWEAGKPL +EEVEVAPP+  EVR+K++ T +CHTD Y          FP I GHE  G+VESVGEGVT  + GD V+P++  +C EC  C + ++N+C  +R+   RG+M  D  SRF+ KGK ++HF+GTSTFSEYTV     +A ++P APLDKVC+L CGISTG+GA +N AK + G T A+FGLGAVGLAA
Sbjct:    2 TAGQVIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEGAFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQGRGLM-PDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLAA 208          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADHX_CAEEL (Alcohol dehydrogenase class-3 OS=Caenorhabditis elegans GN=H24K24.3 PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.136e-66
Identity = 119/210 (56.67%), Postives = 154/210 (73.33%), Query Frame = 2
Query:   23 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLA 652
            MS TAGQVI CKAAVAW A  PL IE ++VAPP+ +EVR+KIL+T++CHTD Y  +      LFP + GHE  GIVESVGEGVT   PGDHV+P++  +CKEC +C + ++N+C  +RI+   G M  DG SRF+  GK ++HF+G STFSEYTV     + K+NP APL+KV +L CGISTG+GA +N  K ++G TVA++GLGAVGLA
Sbjct:    1 MSSTAGQVINCKAAVAWSAKAPLSIETIQVAPPKAHEVRVKILYTAVCHTDAYTLDGHDPEGLFPVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLCQKIRISQGNGFM-PDGSSRFTCNGKQLFHFMGCSTFSEYTVVADISLCKVNPEAPLEKVSLLGCGISTGYGAVLNTCKVEEGSTVAVWGLGAVGLA 209          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADHX_RABIT (Alcohol dehydrogenase class-3 OS=Oryctolagus cuniculus GN=ADH5 PE=2 SV=3)

HSP 1 Score: 251.136 bits (640), Expect = 3.643e-66
Identity = 122/207 (58.94%), Postives = 154/207 (74.40%), Query Frame = 2
Query:   35 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAA 655
            A +VI+CKAAVAWEAGKPL IEE+EVAPP+ +EVR+KI  T++CHTD Y          FP I GHE  GIVESVGEGVT+L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG+GA +N AK + G T A+FGLG VGLAA
Sbjct:    2 ANKVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIFATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTNLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGGVGLAA 207          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADHX_SPAAU (Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.808e-65
Identity = 119/207 (57.49%), Postives = 150/207 (72.46%), Query Frame = 2
Query:   32 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLA 652
            TAG+VI+CKAAVAWE GKPL IEEVEVAPP  +EVR+K+  T +CHTD Y         LFP I GHE  G VESVGEGVT  +PGD V+P++  +C EC  C + ++N+C  +RI   +G ++ D  SRF+ KGK ++HF+GTSTFSEYTV     +AK+N  AP+DKVC+L CGISTG+GA +N AK + G T A+FGLGAVGLA
Sbjct:    3 TAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPEGLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQGQG-LLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGISTGYGAALNTAKVEPGSTCAVFGLGAVGLA 208          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADHX_BOVIN (Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH5 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.808e-65
Identity = 122/206 (59.22%), Postives = 152/206 (73.79%), Query Frame = 2
Query:   35 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLA 652
            A QVI+CKAAVAWEAGKPL IEEVEVAPP+ +EVR+KI+ T++CHTD Y          +P I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG+GA +N AK + G T A+FGLG VGLA
Sbjct:    2 ANQVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGNYPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAALNAAKVEPGSTCAVFGLGGVGLA 206          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 248.054 bits (632), Expect = 3.084e-65
Identity = 121/206 (58.74%), Postives = 151/206 (73.30%), Query Frame = 2
Query:   35 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLA 652
            A +VI+CKAAVAWEAGKPL IEE+EVAPP+ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CGISTG+GA VN AK + G   A+FGLG VGLA
Sbjct:    2 ANEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLA 206          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADHX_DICDI (Alcohol dehydrogenase class-3 OS=Dictyostelium discoideum GN=adh5 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.261e-65
Identity = 121/209 (57.89%), Postives = 149/209 (71.29%), Query Frame = 2
Query:   32 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLAAA 658
            T G+VI CKAAVAWEA KPLVIE++EV PPQK EVR+KIL+T +CHTD Y         +FP I GHE GGIVES+GEGVT ++ GDHV+P++  EC  C  C S ++N+C  +RI   +G M  DG +RF  KGK I+HF+GTSTFS+YTV        +   APLDKVC+L CGI+TGFGA    AK ++G TVAIFGLGAVGL+ A
Sbjct:    3 TEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPEGIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQGKGQM-PDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGITTGFGAAKITAKVEEGSTVAIFGLGAVGLSVA 210          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 6.871e-65
Identity = 119/206 (57.77%), Postives = 150/206 (72.82%), Query Frame = 2
Query:   35 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLA 652
            A  VI+CKAAVAWEAGKPL IEE+EVAPP+ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT  +PGD V+P++  +C EC  C + ++N+C  +R+   +GVM  DG SRF+ KGK + HF+GTSTFSEYTV     + KIN +APLDKVC+L CG+STG+GA +N AK + G T A+FGLG VGLA
Sbjct:    1 ASGVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRVKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKFKPGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGVM-PDGTSRFTCKGKQVLHFMGTSTFSEYTVVADISLTKINASAPLDKVCLLGCGVSTGYGAALNTAKVEPGSTCAVFGLGGVGLA 205          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADHX_HORSE (Alcohol dehydrogenase class-3 OS=Equus caballus GN=ADH5 PE=1 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 6.871e-65
Identity = 121/206 (58.74%), Postives = 151/206 (73.30%), Query Frame = 2
Query:   35 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLA 652
            + +VI+CKAAVAWEAGKP+ IEEVEVAPP+ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R    +G+M  DG SRF+ KGK I H++GTSTFSEYTV     VAKI+P APLDKVC+L CG+STG+GA VN AK + G T AIFGLG VGLA
Sbjct:    2 SAEVIKCKAAVAWEAGKPVSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPQTNLCQKIRTTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGAAVNTAKVEPGSTCAIFGLGGVGLA 206          
BLAST of FC925341 vs. ExPASy Swiss-Prot
Match: ADHX_DROME (Alcohol dehydrogenase class-3 OS=Drosophila melanogaster GN=Fdh PE=1 SV=3)

HSP 1 Score: 242.662 bits (618), Expect = 1.296e-63
Identity = 117/210 (55.71%), Postives = 151/210 (71.90%), Query Frame = 2
Query:   23 MSGTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQTVAIFGLGAVGLA 652
            MS T G+VI CKAAVAWEA KPLVIE++EVAPP+ +EVR+KI  T +CHTD +         LFP + GHE  GIVESVGEGVT+ + GDHV+ ++  +C EC  C S ++N+C  +R+    GVM  +G SR S KG+ ++HF+GTSTF+EYTV     + KIN  APL+KVC+L CGISTG+GA +N AK + G T A++GLGAVGLA
Sbjct:    1 MSATEGKVITCKAAVAWEAKKPLVIEDIEVAPPKAHEVRIKITATGVCHTDAFTLSGADPEGLFPVVLGHEGAGIVESVGEGVTNFKAGDHVIALYIPQCNECKFCKSGKTNLCQKIRLTQGAGVM-PEGTSRLSCKGQQLFHFMGTSTFAEYTVVADISLTKINEKAPLEKVCLLGCGISTGYGAALNTAKVEAGSTCAVWGLGAVGLA 209          
The following BLAST results are available for this feature:
BLAST of FC925341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 155
Match NameE-valueIdentityDescription
ADHH_GADMO1.635e-6657.69Alcohol dehydrogenase class-3 chain H OS=Gadus mor... [more]
ADHX_CAEEL2.136e-6656.67Alcohol dehydrogenase class-3 OS=Caenorhabditis el... [more]
ADHX_RABIT3.643e-6658.94Alcohol dehydrogenase class-3 OS=Oryctolagus cunic... [more]
ADHX_SPAAU1.808e-6557.49Alcohol dehydrogenase class-3 OS=Sparus aurata PE=... [more]
ADHX_BOVIN1.808e-6559.22Alcohol dehydrogenase class-3 OS=Bos taurus GN=ADH... [more]
ADHX_HUMAN3.084e-6558.74Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_DICDI5.261e-6557.89Alcohol dehydrogenase class-3 OS=Dictyostelium dis... [more]
ADHX_UROHA6.871e-6557.77Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_HORSE6.871e-6558.74Alcohol dehydrogenase class-3 OS=Equus caballus GN... [more]
ADHX_DROME1.296e-6355.71Alcohol dehydrogenase class-3 OS=Drosophila melano... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YH22FM1 TF Citrus clementina cDNA clone KN0AAP8YH22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925341 ID=FC925341; Name=FC925341; organism=Citrus clementina; type=EST; length=659bp
AGTATCATCATTCATCATCAATATGTCTGGCACAGCTGGTCAAGTTATTC
GCTGCAAAGCGGCGGTGGCATGGGAGGCGGGGAAGCCACTAGTGATTGAA
GAAGTGGAGGTGGCTCCACCACAGAAAAATGAAGTTCGATTGAAGATCCT
CTTCACCTCTTTATGCCATACTGATGTTTACTTCTGGGAAGCCAAAGGAC
AAACACCTCTCTTTCCTCGCATTTTTGGTCATGAAGCTGGAGGGATTGTA
GAAAGTGTAGGGGAGGGGGTAACTGATCTCCAACCAGGAGACCATGTTCT
TCCTGTATTCACAGGAGAGTGCAAGGAATGTCCTCACTGTCATTCAGAGG
AAAGCAATATGTGTGACCTCCTCCGGATCAATACTGACAGGGGTGTTATG
ATTAATGATGGTCAGTCAAGGTTCTCGATTAAGGGGAAGCCAATTTACCA
TTTTGTGGGCACTTCTACCTTCAGTGAATACACTGTTACCCACGTCGGTT
GTGTTGCTAAGATCAATCCTGCTGCCCCTCTTGACAAAGTTTGTGTACTC
AGCTGCGGAATCTCCACAGGTTTTGGGGCTACTGTTAATGTTGCCAAACC
GAAAAAGGGCCAGACTGTTGCCATTTTTGGATTGGGTGCAGTTGGCCTTG
CTGCTGCCG
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