FC925345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.042e-21 Identity = 65/182 (35.71%), Postives = 98/182 (53.85%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT-YHLYTPSEVE 548 EK S L + S K+ I +HIG SG+ D R LV AR Q + Y EP+ T Q + +A E + RPFGVSLLIAG DE P L+ +DPSG ++ A A+G + + L+++YN+DL L++A A+ LK+ E ++T +N+++ + TP+EV+ Sbjct: 49 EKKQKSILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIP---TAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFKRLTPAEVK 227
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.667e-21 Identity = 65/169 (38.46%), Postives = 93/169 (55.03%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA 503 VEK T L + S KI+ +D HI A +GL ADAR L+ AR+E Q+HR + +P+TVE T+ + L ++ + RPFG+S LI G D P+LY TDPSGTF A A G +S L++ Y K+ QE +A+ L +V+E N+++A Sbjct: 46 VEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNY-KESAGQETVKLAIRALLEVVES--GGKNIEVA 208
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA7_SCHPO (Probable proteasome subunit alpha type-7 OS=Schizosaccharomyces pombe GN=SPBC106.16 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.760e-21 Identity = 59/173 (34.10%), Postives = 100/173 (57.80%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP 515 VE+ L S+ +KI +D H+ A +GL ADAR L++ ARVE QNH+ + +P+++E T+ + + ++ + RPFGVS LIAG D +N P +Y T+P+G + A AIG +S+ A L++ + + L+ E +A+S L +V++ N+++A + P Sbjct: 46 VERKNVPKLQNVSNFQKIAMVDNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKY---TQSGGVRPFGVSTLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDETIHLAVSSLLEVVQ--TASGNIELAIMDP 213
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSJ (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica GN=PAD1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.760e-21 Identity = 66/169 (39.05%), Postives = 94/169 (55.62%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA 503 VEK T L + SV KI +D HI A +GL ADAR L+ ARVE Q+HR + + +TVE T+ + L ++ + RPFG+S LI G D + P+LY TDPSGTF A A G +S L++ Y K+ + +E +A+ L +V+E N++IA Sbjct: 46 VEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGKETIKLAIRALLEVVES--GGKNIEIA 208
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA7B_ORYSI (Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica GN=PAD1 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 7.760e-21 Identity = 66/169 (39.05%), Postives = 94/169 (55.62%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA 503 VEK T L + SV KI +D HI A +GL ADAR L+ ARVE Q+HR + + +TVE T+ + L ++ + RPFG+S LI G D + P+LY TDPSGTF A A G +S L++ Y K+ + +E +A+ L +V+E N++IA Sbjct: 46 VEKKSTPKLQDSRSVRKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKY---TQSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNY-KETSGKETIKLAIRALLEVVES--GGKNIEIA 208
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA2_HUMAN (Proteasome subunit alpha type-2 OS=Homo sapiens GN=PSMA2 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 7.760e-21 Identity = 64/182 (35.16%), Postives = 98/182 (53.85%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT-YHLYTPSEVE 548 EK S L + SV K+ I +HIG SG+ D R LV AR Q + Y EP+ T Q + +A E + RPFGVSLLI G +E P L+ +DPSG ++ A A+G + + L+++YN+DL L++A A+ LK+ E ++T +N+++ + TP+EV+ Sbjct: 49 EKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIP---TAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEVK 227
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA2_BOVIN (Proteasome subunit alpha type-2 OS=Bos taurus GN=PSMA2 PE=1 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 7.760e-21 Identity = 64/182 (35.16%), Postives = 98/182 (53.85%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT-YHLYTPSEVE 548 EK S L + SV K+ I +HIG SG+ D R LV AR Q + Y EP+ T Q + +A E + RPFGVSLLI G +E P L+ +DPSG ++ A A+G + + L+++YN+DL L++A A+ LK+ E ++T +N+++ + TP+EV+ Sbjct: 49 EKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIP---TAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEVK 227
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.014e-20 Identity = 64/198 (32.32%), Postives = 103/198 (52.02%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA--RVAPTYHLYTPSEVEAVINRL*VSRENH 587 VEK + L + +V KI +D+++ A +GL ADAR ++ ARVE Q+HR + + +TVE T+ + L R+ + + RPFG+S LI G D +G P LY TDPSGT+ A AIG ++ L++ Y + + TI L I + + N+++A R + P E+E + + +E + Sbjct: 45 VEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGR---RPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIEEYVAEIEKEKEEN 239
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA2_RAT (Proteasome subunit alpha type-2 OS=Rattus norvegicus GN=Psma2 PE=1 SV=3) HSP 1 Score: 100.138 bits (248), Expect = 1.014e-20 Identity = 64/181 (35.36%), Postives = 97/181 (53.59%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT-YHLYTPSEV 545 EK S L + SV K+ I +HIG SG+ D R LV AR Q + Y EP+ T Q + +A E + RPFGVSLLI G +E P L+ +DPSG ++ A A+G + + L+++YN+DL L++A A+ LK+ E ++T +N+++ + TP+EV Sbjct: 49 EKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIP---TAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEV 226
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA2_MOUSE (Proteasome subunit alpha type-2 OS=Mus musculus GN=Psma2 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.014e-20 Identity = 64/181 (35.36%), Postives = 97/181 (53.59%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPT-YHLYTPSEV 545 EK S L + SV K+ I +HIG SG+ D R LV AR Q + Y EP+ T Q + +A E + RPFGVSLLI G +E P L+ +DPSG ++ A A+G + + L+++YN+DL L++A A+ LK+ E ++T +N+++ + TP+EV Sbjct: 49 EKKQKSILYDERSVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIP---TAQLVQRVASVMQEYTQSGGVRPFGVSLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAGFRRLTPTEV 226 The following BLAST results are available for this feature:
BLAST of FC925345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925345 ID=FC925345; Name=FC925345; organism=Citrus clementina; type=EST; length=649bpback to top |