FC925345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_ORYSJ (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica GN=PAF1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.258e-20 Identity = 60/160 (37.50%), Postives = 87/160 (54.37%), Query Frame = 3 Query: 39 SSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYN--KDLTLQEAETIALSILKQVME-EKVTPNNVDIARV 509 S K+ + +H G A++GL AD R L R E NH F Y P+ V L D A + S RP+GV LL+AG DE+G LYY PSG +++ A AIGS S+ A + L+ ++ D T ++ ALS +K+ ++ EK+T +N +A V Sbjct: 58 SHQRKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVC---TQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYNDYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIV 214
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA4_CAEEL (Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=2 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 2.949e-20 Identity = 56/153 (36.60%), Postives = 90/153 (58.82%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA 503 EK+ + ++I C ++G+ ADA L+ H R ++R SYGE M VE Q LC+ R+ + RPFGVSLL G D++ G LY +DPSG + A IGS+ + A + L+++Y K L+EA+ +A+ +L + ++ K+ V++A Sbjct: 63 EKVYRLSDNISCTVAGITADANILINHLRWWAASYRNSYGEEMPVEQLVQNLCNEKQRY---TQIGGKRPFGVSLLYIGWDKHYGYQLYQSDPSGNYTGWKATCIGSNHQAAVTLLKQEY-KSPNLEEAKQLAIKVLWKTLDVKLASEKVEMA 211
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA73_DROME (Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster GN=Pros28.1B PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.851e-20 Identity = 55/156 (35.26%), Postives = 87/156 (55.77%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVM 467 VEK L E V KI +D+H+ SGL ADAR LV A++E Q+HR ++ +P TVE T+ + L + + + RPFG+S L+ G DE+G P L+ TDPSG F++ A G SS+ +++ ++ LT+ + I++ ++ Sbjct: 47 VEKRSVGDLQEERMVRKICMLDDHVVMTFSGLTADARILVSRAQMEAQSHRLNFEKPTTVEYITRYIAQLKQNYTQSNGR---RPFGLSCLVGGFDEDGTPHLFQTDPSGIFYEWRANTTGRSSQPVRDYMEKHADEILTIADEAAAIKHIVRTLV 199
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.030e-20 Identity = 55/168 (32.74%), Postives = 93/168 (55.36%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPS-LYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA 503 VEK + L E V KI +D H+ A +GL ADAR ++ A+VE Q+HR + +P+T+E T+ + L ++ + + RPFG+S LI G D +G + L+ T+PSG F++ A A G S++ ++ Y ++ E + L+I + + NN+++A Sbjct: 47 VEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGR---RPFGISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRALLEVAQSGQNNLEVA 211
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA7_DICDI (Proteasome subunit alpha type-7 OS=Dictyostelium discoideum GN=psmA7 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.121e-19 Identity = 58/168 (34.52%), Postives = 99/168 (58.93%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENG-PSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA 503 VEK T+ L + S+ KI+++D+HI +GL AD+R L+ A +E Q++R + + +VE ++ + + R+ + RPFG+S LI G D +G P+LY TDPSG++ A AIG SS+ L++ Y D++ +E+ +A+ L +++E N++IA Sbjct: 48 VEKKATAKLQDARSIRKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRY---TQSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEKNYT-DVSEEESIKLAVRALLEIVES--GNKNIEIA 209
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1B_ARATH (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana GN=PAF2 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.464e-19 Identity = 57/179 (31.84%), Postives = 94/179 (52.51%), Query Frame = 3 Query: 39 SSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETI--ALSILKQVMEEKVTPNN---VDIARVAPTYHLYTPSEVEAVIN 560 S KI ++D+HIG A++GL AD R L + R E+ NH F+Y P+ V L D A + S RP+GV LL+ G DE+G LYY PSG +++ A AIGS S+ A + L+ ++ + + I A+ +++ ++ + ++ V + V +H ++ VI+ Sbjct: 58 SHQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVC---TQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQESIQKVID 233
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1A_ARATH (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1 PE=1 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 2.496e-19 Identity = 58/179 (32.40%), Postives = 95/179 (53.07%), Query Frame = 3 Query: 39 SSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNK--DLTLQEAETIALSILKQVMEEKVTPNN---VDIARVAPTYHLYTPSEVEAVIN 560 S KI ++D+HIG A++GL AD R L + R E+ NH F+Y P+ V L D A + S RP+GV LL+ G DE+G LYY PSG +++ A AIGS S+ A + L+ ++ D + ++ A+ +++ ++ + ++ V I V +H ++ VI+ Sbjct: 58 SHQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVC---TQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFGDSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVID 233
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.258e-19 Identity = 59/171 (34.50%), Postives = 96/171 (56.14%), Query Frame = 3 Query: 51 KIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD--ENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNK---DLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVE 548 K+ +ID H+ + SGL AD+R L+E ARVE Q+HR + +P+TVE T+ + + R+ + RPFGVS LIAG D ++ P LY T+PSG + +A+ IG +S+ L++ Y++ T++E + + L +V++ N++I V P + S E Sbjct: 63 KVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRY---TQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQ--TGAKNIEITVVKPDSDIVALSSEE 228
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA4_SCHPO (Probable proteasome subunit alpha type-4 OS=Schizosaccharomyces pombe GN=SPAC13C5.01c PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.561e-19 Identity = 60/196 (30.61%), Postives = 100/196 (51.02%), Query Frame = 3 Query: 6 EKLFTSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVME-EKVTPNNVDIARVAP-------TYHLYTPSEVEAVINR 563 EK TS LLE S EK+ I +++ CA++GL ADA L+ +AR Q + ++ E M E + +CDL + + RPFGVS L AG D G L+ ++PSG + A +IG +S S ++++Y D+ L EA +A+ L + ++ +T ++ A + ++ E+ V+N+ Sbjct: 48 EKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTADANILINYARRVGQQYLQTFNEEMPCEQLVRRVCDLKQGY---TQYGGLRPFGVSFLYAGWDHIRGYQLFQSNPSGNYGSWQANSIGGNSTSVQSLMRQEYKDDINLDEASAMAVKFLSKTLDSNSLTHEKIEFATITKDTTKNKMVCKIWKSDEINEVLNK 240
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA2_YEAST (Proteasome component Y7 OS=Saccharomyces cerevisiae GN=PRE8 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.561e-19 Identity = 62/168 (36.90%), Postives = 95/168 (56.55%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHAR-VETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA 503 EK +SPL ++ K+ + IG SG+ D R LV+ +R V +++ YGE T + ++A E + RPFGVSLLIAG DE NG SLY DPSG+++ A AIG S A + L++++N +L L++A IAL LK+ +E + + +++A Sbjct: 48 EKKSSSPLAMSETLSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGE---YPPTKLLVSEVAKIMQEATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWNDELELEDAIHIALLTLKESVEGEFNGDTIELA 212 The following BLAST results are available for this feature:
BLAST of FC925345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925345 ID=FC925345; Name=FC925345; organism=Citrus clementina; type=EST; length=649bpback to top |