FC925345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_DICDI (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum GN=psmA1 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.052e-17 Identity = 55/163 (33.74%), Postives = 87/163 (53.37%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDL----ALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYN--KDLTLQEAETIALSILKQVM---EEKVTPNNVDIARV 509 +KI +D+H+G A+SGL ADAR L + R E N+ + Y M VE + D R+G RP+GV LL+AG D+ G +Y T PSG F+ + +IGS S+ A + L++ + ++ TL++ T L L++ + ++ + NV I V Sbjct: 61 KKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHTQRYGR-------RPYGVGLLVAGYDQLGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFEECTLEQLITHGLRALRETIPNTDDTLNSKNVSIGIV 216
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA72_DROME (Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster GN=Pros28.1A PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 6.798e-17 Identity = 51/168 (30.36%), Postives = 90/168 (53.57%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPS-LYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA 503 VEK S + E +V KI +D H+ A +GL ADAR L+ +VE Q+HR ++ +T+E T+ L L ++ + + RPFG+S LI G D +G + L++T+PSG F + A A G + ++ Y+ + + I L++ + +++ +++A Sbjct: 47 VEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGR---RPFGISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQMRLEVA 211
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA3_DICDI (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum GN=psmA3 PE=2 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 6.798e-17 Identity = 50/160 (31.25%), Postives = 86/160 (53.75%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCD---LALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE 473 VEKL S +L S ++ ID H+G A++G +ADAR L+ AR E +N++ +YG+P+ ++ +Q + + +G RPFG S+ I G D+ GP L+ +PSG+ ++G + A + L++ ++T +EA I+ V +E Sbjct: 50 VEKLVPSKMLCSGSNRRVHHIDTHVGVAIAGFLADARQLITRARSEAKNYKSTYGQPIPIKVLSQRIASYNHMHTLYGS------VRPFGCSIAITGIDQYGPQLFLVEPSGSCVGYFGASLGKGKQAAKNELEKIKFSEMTCREAIKEVSRIIYSVHDE 203
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 8.879e-17 Identity = 54/180 (30.00%), Postives = 94/180 (52.22%), Query Frame = 3 Query: 27 LLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG-SDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKD--LTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVE 548 LL+ +SV + I +++G +G+ ADARTLV+ AR E RF+YG M V+ + + D + + + + RP GV ++ G DE GP LY DP+G ++ A + G + A + L+++ D T +E A+S L+ V++E +++ V P + + T E++ Sbjct: 60 LLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVY---TQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEID 236
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_MOUSE (Proteasome subunit alpha type-1 OS=Mus musculus GN=Psma1 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.406e-16 Identity = 56/183 (30.60%), Postives = 91/183 (49.73%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLAL----RFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNK--DLTLQEAETIALSILKQVM--EEKVTPNNVDIARVAP--TYHLYTPSEVEAVINRL 566 +KI+ +D HIG +++GL ADAR L R E + RF + P+ V + R+G RP+GV LLIAG D+ GP ++ T PS ++ C A +IG+ S+ A + L+ ++ + L E L L++ + E+ +T NV I V + +Y +V ++ L Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGR-------RPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGL 236
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_MACFA (Proteasome subunit alpha type-1 OS=Macaca fascicularis GN=PSMA1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.755e-16 Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLAL----RFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNK--DLTLQEAETIALSILKQVM--EEKVTPNNVDIARVAP--TYHLYTPSEVEAVINRL 566 +KI+ +D HIG +++GL ADAR L R E + RF + P+ V + R+G RP+GV LLIAG D+ GP ++ T PS ++ C A +IG+ S+ A + L+ ++ + L E L L++ + E+ +T NV I V + +Y +V + L Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGR-------RPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGL 236
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_HUMAN (Proteasome subunit alpha type-1 OS=Homo sapiens GN=PSMA1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.755e-16 Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLAL----RFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNK--DLTLQEAETIALSILKQVM--EEKVTPNNVDIARVAP--TYHLYTPSEVEAVINRL 566 +KI+ +D HIG +++GL ADAR L R E + RF + P+ V + R+G RP+GV LLIAG D+ GP ++ T PS ++ C A +IG+ S+ A + L+ ++ + L E L L++ + E+ +T NV I V + +Y +V + L Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGR-------RPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGL 236
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_CHICK (Proteasome subunit alpha type-1 OS=Gallus gallus GN=PSMA1 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 5.755e-16 Identity = 54/162 (33.33%), Postives = 82/162 (50.62%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLAL----RFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNK--DLTLQEAETIALSILKQVM--EEKVTPNNVDIARV 509 +KI+ +D HIG +++GL ADAR L R E + RF + P+ V + R+G RP+GV LLIAG D+ GP ++ T PS ++ C A +IG+ S+ A + L+ + D L E L L++ + E+ +T NV I V Sbjct: 60 KKILYVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGR-------RPYGVGLLIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARNYLERHMTEFTDCNLNELVKHGLRALRETLPAEQDLTTKNVSIGIV 214
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_BOVIN (Proteasome subunit alpha type-1 OS=Bos taurus GN=PSMA1 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.755e-16 Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLAL----RFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNK--DLTLQEAETIALSILKQVM--EEKVTPNNVDIARVAP--TYHLYTPSEVEAVINRL 566 +KI+ +D HIG +++GL ADAR L R E + RF + P+ V + R+G RP+GV LLIAG D+ GP ++ T PS ++ C A +IG+ S+ A + L+ ++ + L E L L++ + E+ +T NV I V + +Y +V + L Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGR-------RPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLEGL 236
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA3_SCHPO (Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces pombe GN=SPCC1795.04c PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.516e-16 Identity = 52/158 (32.91%), Postives = 78/158 (49.37%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEK 476 +EK+ TS LL+P +I +D HIG A +G I D + +V+ AR E + R +YG P+ L + F S RPFGV +A D GP LY +P+G +W N A G + A + L++ L +++A A IL +E+ Sbjct: 49 LEKVVTSKLLKPRVNNRIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLF---TCYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEAARILYATHDEE 203 The following BLAST results are available for this feature:
BLAST of FC925345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925345 ID=FC925345; Name=FC925345; organism=Citrus clementina; type=EST; length=649bpback to top |