FC925345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_PONAB (Proteasome subunit alpha type-1 OS=Pongo abelii GN=PSMA1 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.516e-16 Identity = 53/162 (32.72%), Postives = 83/162 (51.23%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLAL----RFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNK--DLTLQEAETIALSILKQVM--EEKVTPNNVDIARV 509 +KI+ +D HIG +++GL ADAR L R E + RF + P+ V + R+G RP+GV LLIAG D+ GP ++ T PS ++ C A +IG+ S+ A + L+ ++ + L E L L++ + E+ +T NV I V Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGR-------RPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIV 215
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_TRYCR (Proteasome subunit alpha type-1 OS=Trypanosoma cruzi PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 9.817e-16 Identity = 51/148 (34.46%), Postives = 80/148 (54.05%), Query Frame = 3 Query: 21 SPLLEPSSV-EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNK--DLTLQEAETIALSIL 455 SP+ + SS EK+ ++D+H+G A++GL+AD R L R E N+R+ + + + + + ++ + + RPFGV LLIAG D GP LY+T PSG + A A+G S+ A + L++ + D L E AL L Sbjct: 52 SPVAQFSSYQEKVFKLDDHVGMAIAGLVADGRMLARFVRTECMNYRYMHDSDNPLPLIAEIVGE---KYQRHIQFAGKRPFGVGLLIAGYDSTGPHLYHTVPSGDVFDFKATAMGLRSQAARTYLEKHFESFPDCGLDELIMHALKAL 196
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_RAT (Proteasome subunit alpha type-1 OS=Rattus norvegicus GN=Psma1 PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 9.817e-16 Identity = 56/183 (30.60%), Postives = 90/183 (49.18%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLAL----RFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNK--DLTLQEAETIALSILKQVM--EEKVTPNNVDIARVAP--TYHLYTPSEVEAVINRL 566 +KI+ +D HIG +++GL ADAR L R E + RF + P+ V + R+G RP+GV LLIAG D+ GP ++ T PS ++ C A +IG+ S+ A + L+ ++ L E L L++ + E+ +T NV I V + +Y +V ++ L Sbjct: 61 KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGR-------RPYGVGLLIAGYDDMGPHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMQCNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGL 236
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.187e-15 Identity = 51/183 (27.87%), Postives = 92/183 (50.27%), Query Frame = 3 Query: 27 LLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVME-EKVTPNNVDIARVAPT--YHLYTPSEVEAVINRL 566 L+ + +KI +IDEHI ++G +ADA++L+++ + E +R E +++E+ ++ S PF V L+ G DENG +Y DPSG + GS S A L+++Y+ +L + EA +A+ +K ME + + N + +A V + + + E++ I L Sbjct: 34 LIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANIL-------HSSRFYPFIVQTLLGGVDENGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGILVATVTEEEGFRMLSEEEIQKRIENL 209
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.856e-15 Identity = 53/190 (27.89%), Postives = 91/190 (47.89%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD-ENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQY--NKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 566 +K LL+ SSV + + +++G +G+ AD+R+LV+ AR E RF YG M + + + D + + + + RP GV ++ G D E GP LY DP+G F+ A + G + A + L+++ N T E A+S L+ V++E +++ V L+ E + L Sbjct: 53 QKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVY---TQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHL 239
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA4L_DROME (Proteasome subunit alpha type-4-like OS=Drosophila melanogaster GN=Prosalpha3T PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.363e-15 Identity = 56/184 (30.43%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 45 VEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD-ENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQ-EQYNKDL---TLQEAETIALSILKQVM-EEKVTPNNVDIARV-----APTYHLYTPSEVEAVINR 563 V +I ++E+I C +G AD LV R+ Q ++F++GE + E LCD+ + + RPFGVS L G D G LY +DPSG + A IG S A LQ E ++K +++EA+ +A+ ++ + + +TP ++IA V +H+ +E+ +I R Sbjct: 61 VPRISWLNENIACCATGNTADGNVLVNQLRMIAQQYQFNFGEMIPCEQLVTNLCDIKQAY---TQYGGKRPFGVSFLYMGWDCRFGFQLYQSDPSGNYSGWKATCIGRKSGAAMEMLQKELFSKGYVSPSVEEAKDVAIKVMGMTLGRDSLTPEKLEIAFVQRYGNTTVFHILEKNEIHRLIER 241
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA3_SPIOL (Proteasome subunit alpha type-3 OS=Spinacia oleracea GN=PAG1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 8.310e-15 Identity = 49/163 (30.06%), Postives = 78/163 (47.85%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA------LCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE 473 VEKL S ++ P S +I + H G A++GL AD R +V A+ E N+ YGE + V+ LC L RPFG +++ G D +GP LY +PSG ++ AIG + A + +++ ++T +E I+ +V +E Sbjct: 50 VEKLIQSKMMLPGSNRRIHSVHRHSGMAVAGLAADGRQIVARAKSEATNYESVYGEAVPVKELADRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMVEPSGISYRYFGAAIGKGKQAAKTEIEKLKLSEMTCREGIIEVAKIIYKVHDE 203
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.418e-14 Identity = 49/163 (30.06%), Postives = 79/163 (48.47%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA------LCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE 473 VEKL TS ++ S +I + H G A++GL AD R +V A+ E ++ YGEP++V+ LC L RPFG +++ G D +GP LY +PSG ++ A+G + A + +++ +LT +E I+ V +E Sbjct: 50 VEKLVTSKMMLEGSNRRIHSVHWHSGLAVAGLAADGRQIVSRAKSEAASYEKVYGEPISVKELADRVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMIEPSGVSYKYFGAALGKGRQAAKTEIEKLKLSELTCREGIVEVAKIIYGVHDE 203
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA3_MOUSE (Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 2.418e-14 Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG-SDENGPSLYYTDPSGT---FWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE 473 VEKL S L E S +++ +D H+G A++GL+ADAR+L + AR E N R ++G + ++ +A+ S RPFG S ++ S +G LY DPSG +W C AIG + + A + +++ K++T ++ I+ V +E Sbjct: 50 VEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADR---VAMYVHAYTLYSAVRPFGCSFMLGSYSANDGAQLYMIDPSGVSYGYWGC---AIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDE 204
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA3_ARATH (Proteasome subunit alpha type-3 OS=Arabidopsis thaliana GN=PAG1 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.418e-14 Identity = 46/163 (28.22%), Postives = 81/163 (49.69%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQA------LCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE 473 VEKL S ++ P S +I + H G A++GL AD R +V A+ E +++ YG+ + V+ ++ LC L RPFG +++ G D +GP LY +PSG ++ AIG + A + +++ ++T +E I+ ++ +E Sbjct: 50 VEKLIASKMMLPGSNRRIHSVHRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYW---------WLRPFGCGVILGGYDRDGPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEKLNLSEMTCKEGVIEVAKIIYKLHDE 203 The following BLAST results are available for this feature:
BLAST of FC925345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925345 ID=FC925345; Name=FC925345; organism=Citrus clementina; type=EST; length=649bpback to top |