FC925345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBR (Proteasome subunit alpha type-1 OS=Trypanosoma brucei rhodesiense PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.418e-14 Identity = 45/120 (37.50%), Postives = 65/120 (54.17%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLA-LRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQY 404 EK ++DEH+G A+SGL+AD R L R E N+R+ + ++ L D+ + + + RPFGV LLIAG D GP LY T PSG + A A+G S+ A + L+ + Sbjct: 62 EKAFKLDEHVGMAISGLVADGRALSRFLRTECMNYRYMHDS----DAPLVMLADIVGAKHQRHIQFAGKRPFGVGLLIAGYDRQGPRLYQTVPSGDVFDFKATAMGLRSQAARTYLERHF 177
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.158e-14 Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG-SDENGPSLYYTDPSGT---FWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE 473 VEKL S L E S +++ +D H+G A++GL+ADAR+L + AR E N R ++G + ++ +A+ S RPFG S ++ S +G LY DPSG +W C AIG + + A + +++ K++T ++ I+ V +E Sbjct: 50 VEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADR---VAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGC---AIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDE 204
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 78.5666 bits (192), Expect = 3.158e-14 Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG-SDENGPSLYYTDPSGT---FWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE 473 VEKL S L E S +++ +D H+G A++GL+ADAR+L + AR E N R ++G + ++ +A+ S RPFG S ++ S +G LY DPSG +W C AIG + + A + +++ K++T ++ I+ V +E Sbjct: 50 VEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADR---VAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGC---AIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDE 204
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.124e-14 Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG-SDENGPSLYYTDPSGT---FWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE 473 VEKL S L E S +++ +D H+G A++GL+ADAR+L + AR E N R ++G + ++ +A+ S RPFG S ++ S +G LY DPSG +W C AIG + + A + +++ K++T ++ I+ V +E Sbjct: 50 VEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADR---VAMYVHAYTLYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGC---AIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKIIYIVHDE 204
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13 Identity = 53/190 (27.89%), Postives = 91/190 (47.89%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSD-ENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKD--LTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL 566 +K LL+ +SV + I ++IG +GL ADAR+LV AR E RF +G M V+ + + D A + + + RP GV ++ G D E L+ DP+G F+ A + G + A + L+++ D + +E IA+S L+ V++E +++ V ++ E + L Sbjct: 53 QKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVY---TQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQHL 239
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA6_DICDI (Proteasome subunit alpha type-6 OS=Dictyostelium discoideum GN=psmA6 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.200e-13 Identity = 43/153 (28.10%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVE--TQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAG-SDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSIL 455 +K L++P SV + ++ ++IGC +G++ D+++ A E T +H+F Y P V + + D+A + + +RP GV++++ G DE GP L+ DP+G F A A G + + + L++++ + L + ETI +S++ Sbjct: 52 QKKIPDKLIDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNV--LAKRMADIAQL---STQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSLI 199
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA3_DROME (Proteasome subunit alpha type-3 OS=Drosophila melanogaster GN=Prosalpha7 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.673e-13 Identity = 52/185 (28.11%), Postives = 93/185 (50.27%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQE---QYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEV 545 VEK+ TS L EP + +I I+++IG A++GL+AD + + AR E N+R + + + ++ + + S RPFG+S+++A DE GP LY +PSG+ + A A G + + A + +++ D ++ A I + ++ ++ + RV HL PSE+ Sbjct: 50 VEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAY---TLYSAVRPFGLSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKMDMRTDELVESAGEIIYKVHDELKDKDFRFEMGLVGRVTGGLHLINPSEL 231
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_YEAST (Proteasome component PRE5 OS=Saccharomyces cerevisiae GN=PRE5 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.016e-12 Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTL-----QEAETIALSILKQVMEEKVTPNNVDIARV 509 +KI++ DEH+G +++GL DAR L + R + + + VE LCD A + + RP+GV LLI G D++G L PSG + AIG+ S+GA + L+ + + + + + +I + + +E +T +N+ IA V Sbjct: 61 KKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQK---NTQSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIV 216
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMB_METTE (Proteasome subunit beta OS=Methanosarcina thermophila GN=psmB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.327e-12 Identity = 47/173 (27.17%), Postives = 86/173 (49.71%), Query Frame = 3 Query: 42 SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDP-SGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIAL-SILKQVMEEKVTPNNVDIARVA-PTYHLYTPSEVEA 551 + +K+ +ID+ +G +G + DA+ LV VE+Q ++ E MT++ T + + R + P V LLI G D+NGP +Y D G+ + A GS S A L++QY +++T++E +A+ +I + + N+D+ + + P EV++ Sbjct: 39 TAKKVYQIDDLVGMTTAGSVGDAQQLVRLVSVESQLYKMRRDESMTIKGITTLMSNFLSR-------NRYYPMMVQLLIGGVDKNGPGIYSLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFKRLDPEEVKS 204
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA1_SCHPO (Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces pombe GN=SPAC6G10.04c PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.327e-12 Identity = 49/179 (27.37%), Postives = 93/179 (51.96%), Query Frame = 3 Query: 48 EKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYN--KDLTLQEAETIALSILKQVM--EEKVTPNNVDIARVA--PTYHLYTPSEVEAVINRL 566 +K++ ID+HIG A++GL DAR L + + E + + + P+ V + + +A + +E RP+GV L+ G DE+GP L PSG + ++GS S+ A + ++ + D + +E AL L+ + ++++T NV I+ + Y LY ++ + +++L Sbjct: 61 KKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVR---RLMSKVAEKAQINTQEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQNDTKEWLDKL 236 The following BLAST results are available for this feature:
BLAST of FC925345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925345 ID=FC925345; Name=FC925345; organism=Citrus clementina; type=EST; length=649bpback to top |