FC925345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.194e-29 Identity = 71/169 (42.01%), Postives = 107/169 (63.31%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 509 VEK TS L+EPSS EKI +ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL + RPFG +LL+AG ++ P LY TDPSG +++ A AIGS A + ++ Y+ DL ++ A +A+ L + +EE +P ++++A + Sbjct: 52 VEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAH---TQYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAILALAKTLEEP-SPESIEVAYI 215
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.560e-29 Identity = 72/189 (38.10%), Postives = 108/189 (57.14%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINR 563 +K S LLE ++EKI +IDEHI A SGL+ADAR L++ AR+E Q +R +Y EP+TV+ + +CD ++ + RPFGVSLLIAG DE P LY TDPSG + A AIG +++Y DL+ +A + L + +E ++ P N+++ V T+ +P E++ + R Sbjct: 51 DKRVGSKLLEADTIEKIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQY---TQYGGVRPFGVSLLIAGVDE-VPKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDDLSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVER 235
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.661e-29 Identity = 71/191 (37.17%), Postives = 109/191 (57.07%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRL 566 V+K TS L+E S+EKI +ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE ++ +CD + + RP+G +LLIAG D+N P L+ TDPSG + A AIG+ + +Y +D+ + A + + L + E K + +++ V+ + P EVE + ++ Sbjct: 51 VDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNLPRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQDMNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQQI 238
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 2.661e-29 Identity = 72/191 (37.70%), Postives = 107/191 (56.02%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRL 566 V+K TS L+E S+EKI +IDEHIG A SGL+ADAR+LV+ ARVE Q +R SY EP+ VE ++ +CD + + RP+G +LLIAG D+N P L+ TDPSG + A AIG+ + Y +D+ + A + + L + E K +++ V+ + P EVE + ++ Sbjct: 49 VDKRITSRLVEAESIEKIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQI 236
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.539e-29 Identity = 67/169 (39.64%), Postives = 106/169 (62.72%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA 512 +K SPL+EP+SVEKI + D+H+G A +G +ADAR L++ AR + Q +R YGEP+ +E+ T+ + D ++ + +RPFGV+LLI G ++ P LY TDPSGT ++ A +IG+ L+E Y ++L+L E +AL + ++++T VD+A VA Sbjct: 53 DKRSRSPLMEPTSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQY---TQVGGARPFGVALLIGGIEDGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELSLDEGVGLALRTIAISNDDELTAAGVDVATVA 218
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.742e-29 Identity = 73/193 (37.82%), Postives = 115/193 (59.59%), Query Frame = 3 Query: 6 EKLFTSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE-KVTPNNVDIARVAPT------YHLYTPSEVEAVI 557 EK TS LL+ S S EK+ +ID+H+ CA++G+++DA L+ ARV+ Q + F Y EPM VE Q+LCD + + RPFGVS L AG D+ +G LY +DPSG + A A+G++++ A S L++ Y D T +EA +AL +L + M+ +T +++A V T YH+++P + ++ Sbjct: 48 EKKVTSKLLQTSTSAEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFMYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANNQAAQSILKQDYKDDATREEAVELALKVLTKTMDSTSLTSEKLELAEVYLTPSKTVKYHVHSPESLTKLL 237
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.321e-28 Identity = 66/188 (35.11%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAP-TYHLYTPSEVEAVINRL 566 EK TSPL + ++ K+ +D+H+GC SG+ D R LV+ AR Q +R +Y EPM + +Q + ++ F E + RPFG SLL+AG+D G LY DPSGTFW A +IG S A + L+++Y ++ +++A AL LK+ + ++T N + RV + L T +++ ++++ Sbjct: 47 EKKTTSPLADSLTLHKVFALDDHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPI---SQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTNEMEIEDAVHTALLTLKEGFDGRMTAENTQVGRVVEGRFELLTVEQLKDYLDQI 231
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA2_HALMA (Proteasome subunit alpha 2 OS=Haloarcula marismortui GN=psmA2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.725e-28 Identity = 68/163 (41.72%), Postives = 102/163 (62.58%), Query Frame = 3 Query: 21 SPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 509 SPL+E S+EKI EID H+G A +G +ADAR L++ AR ++Q +R Y EP +VES T+ + D ++ + +RPFGV+LL+AG ++ P L+ TDPSGT ++ A AIG S E + L+E+Y + + L+ +AL L V E+ + VDIA + Sbjct: 57 SPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVARRQSQVNRLRYDEPASVESLTKEITDYIQQY---TQTGGARPFGVALLVAGIEDGEPRLFETDPSGTPYEWQAVAIGGSREDIQTFLEEEYAEGMDLEGGIELALRALASVNEDGLDATGVDIATI 216
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.725e-28 Identity = 71/171 (41.52%), Postives = 106/171 (61.99%), Query Frame = 3 Query: 6 EKLFTSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE-KVTPNNVDIARV 509 EK TS LL+ S S EK+ +ID+H+ CA++G+++DA L+ ARV+ Q + FSY EPM VE Q+LCD + + RPFGVS L AG D+N G LY +DPSG + A AIG++++ A S L++ Y D+T ++A +AL L + M+ +T +++A V Sbjct: 48 EKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKDDVTREDAVKLALKALSKTMDSTSLTSEKLELAEV 215
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.253e-28 Identity = 73/191 (38.22%), Postives = 107/191 (56.02%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEAVINRL 566 V+K S LLEPSS+EKI +ID HIG A SGL+ DAR+LV+ ARVE+Q +R SY E + VE ++ LCD + + +RP+G +LLIAG + L+ TDPSGT + A IG +E+YN + ++++A + L L E K N V+I V P + + EV + + ++ Sbjct: 51 VDKRVNSKLLEPSSIEKIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTY---TQFGGARPYGTALLIAGISDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEYNPEASIRDAILLGLKALHAATEGKFDVNTVEIGVVNNDTPAFRKMSRQEVASFVEQI 238 The following BLAST results are available for this feature:
BLAST of FC925345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925345 ID=FC925345; Name=FC925345; organism=Citrus clementina; type=EST; length=649bpback to top |