FC925345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.018e-28 Identity = 71/169 (42.01%), Postives = 102/169 (60.36%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 509 VEK TS L+EPSS EKI ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL + RPFG +LL+AG +E P L+ TDPSG +++ A AIGS A + +E Y D+ +A +A+ L + +EE T +++A + Sbjct: 52 VEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAH---TQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEP-TAEGIEVAYI 215
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 5.018e-28 Identity = 71/169 (42.01%), Postives = 102/169 (60.36%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 509 VEK TS L+EPSS EKI ID+HI A SG+IADAR LV+ AR+E Q +R +YGEP+ + + +CDL + RPFG +LL+AG +E P L+ TDPSG +++ A AIGS A + +E Y D+ +A +A+ L + +EE T +++A + Sbjct: 52 VEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAH---TQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEP-TAEGIEVAYI 215
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.554e-28 Identity = 70/191 (36.65%), Postives = 107/191 (56.02%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA---PTYHLYTPSEVEAVINRL 566 V+K TS L+E S+EKI +ID+HIG A SGL+ADAR+LV+ ARVE Q +R SY E + VE ++ +CD + + RP+G +LLIAG D+N P L+ TDPSG + A AIG+ + Y +D+ + A + + L + E K +++ V+ + P EVE ++++ Sbjct: 51 VDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQI 238
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.554e-28 Identity = 70/186 (37.63%), Postives = 110/186 (59.14%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEA 551 V+K SPL+E SSVEKI + D+HIG A +G +ADAR L++ AR + Q ++ YGEP+ VE+ T+ + D ++ + +RPFGV+L+I G P L+ TDPSGT ++ A A+G+ L+E Y++ + L E +AL+ L V +++++P + +A V T+ T E EA Sbjct: 52 VDKRIRSPLMERSSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYGEPVGVETLTKEITDYIQQY---TQVGGARPFGVALIIGGIVNGEPRLFETDPSGTPYEWKALAVGADRGDIRDYLEEHYDEGMDLDEGVDLALAALASVNDDELSPEGIGVATVDVETETFGQLTDEEKEA 234
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 6.554e-28 Identity = 70/171 (40.94%), Postives = 106/171 (61.99%), Query Frame = 3 Query: 6 EKLFTSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDEN-GPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE-KVTPNNVDIARV 509 EK TS LL+ S S EK+ +ID+H+ CA++G+++DA L+ ARV+ Q + FSY EPM VE Q+LCD + + PFGVS L AG D+N G L+ +DPSG + A AIG++++ A S L++ Y D+T +EA +AL +L + M+ +T +++A V Sbjct: 48 EKKVTSKLLQTSTSSEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGY---TQYGGLPPFGVSFLFAGWDKNFGFQLFMSDPSGNYAGWKAAAIGANNQAAQSMLKQDYKDDITREEAVQLALKVLSKTMDSTSLTSEKLELAEV 215
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.491e-27 Identity = 63/167 (37.72%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDI 500 EK LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG A L++ Y +DLT+++ +AL L ++ EK+TPN V+I Sbjct: 53 EKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.491e-27 Identity = 63/167 (37.72%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDI 500 EK LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG A L++ Y +DLT+++ +AL L ++ EK+TPN V+I Sbjct: 53 EKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.491e-27 Identity = 63/167 (37.72%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDI 500 EK LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG A L++ Y +DLT+++ +AL L ++ EK+TPN V+I Sbjct: 53 EKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.491e-27 Identity = 63/167 (37.72%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDI 500 EK LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG A L++ Y +DLT+++ +AL L ++ EK+TPN V+I Sbjct: 53 EKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.491e-27 Identity = 63/167 (37.72%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDI 500 EK LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG A L++ Y +DLT+++ +AL L ++ EK+TPN V+I Sbjct: 53 EKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216 The following BLAST results are available for this feature:
BLAST of FC925345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925345 ID=FC925345; Name=FC925345; organism=Citrus clementina; type=EST; length=649bpback to top |