FC925345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_SULIA (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27) GN=psmA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.491e-27 Identity = 63/167 (37.72%), Postives = 101/167 (60.48%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDI 500 EK LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P LY T+PSG + A AIG A L++ Y +DLT+++ +AL L ++ EK+TPN V+I Sbjct: 53 EKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.253e-27 Identity = 65/169 (38.46%), Postives = 103/169 (60.95%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 509 V+K SPL+E +SVEKI + D+HIG A +G +ADAR L++ AR + Q ++ Y EP+ VE+ T+A+ D ++ + +RPFGV+L+I G ++ P LY TDPSGT ++ A A+G+ L+E Y++ L + +AL L V ++ +TP + +A V Sbjct: 52 VDKRIRSPLMERTSVEKIHKADDHIGIASAGHVADARQLIDFARRQAQVNQLRYDEPIGVETLTKAVTDHIQQY---TQVGGARPFGVALIIGGIEDGEPRLYETDPSGTPYEWQALAVGADRGDIQEYLEEHYSESLDTEAGIGLALEALASVNDDSLTPEGIGLATV 217
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.548e-27 Identity = 71/195 (36.41%), Postives = 105/195 (53.85%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLYTPSEVEAVINRL*VSRENH 587 V+K TS L+E S+EKI +ID+HIG A SGL+ADAR LV+ ARVE Q +R SY E + VE ++ +CD + + RP+G +LLIAG D+ P L+ TDPSG + A AIG+ + Y +D+ ++ A + + L + E K +++ V+ + E E V N + E H Sbjct: 49 VDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTY---TQYGGVRPYGTALLIAGVDDKRPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKEDMNIEAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNYVQQILEKH 240
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.548e-27 Identity = 67/170 (39.41%), Postives = 98/170 (57.65%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA 512 V+K TS LLEP S+EKI +ID HIG A SGL+ DAR+LV+ ARVE+Q +R SY EP+ VE + LCD + + +RP+G +LLIAG + L+ TDPSGT + A IG+ + +++Y +D A + + L E K+ + ++I V+ Sbjct: 51 VDKRVTSRLLEPVSIEKIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTY---TQFGGARPYGTALLIAGVSDGEARLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQEDADFSGAIRLGIKALHAATEGKLDVSAIEIGVVS 217
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.464e-27 Identity = 70/169 (41.42%), Postives = 95/169 (56.21%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV 509 V+K +S LLE SS+EKI +IDEHIG A SGL+ DAR LV+ AR+E Q +R SY E + VE+ + LCD + RP+G +LLIAG + L+ TDPSGT + A IG A +E+Y DL L++A + L L E K + V++ V Sbjct: 51 VDKRVSSKLLESSSIEKIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCD---HMQTLTQYGGIRPYGTALLIAGVSDGESRLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADLALKDAILLGLKALHSATEGKFDVDTVEMGIV 216
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.614e-26 Identity = 62/167 (37.13%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDI 500 EK LL+ S+EK+ ID+H+GC+ +GL +D R L+++AR HR Y EP++++ T+++ D+ + + RPFGV+L+IAG D++ P L+ T+PSG + A AIG A L++ Y +DL ++E +AL L ++ EK+TPN V+I Sbjct: 53 EKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMY---TQHGGVRPFGVALVIAGIDKSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKALSATLKPNEKLTPNTVEI 216
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.108e-26 Identity = 71/167 (42.51%), Postives = 102/167 (61.08%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPN-NVDIA 503 EK S L + SS+EKI IDEH+ + SGL+ADAR L+++AR +HRF Y EP+ VE T+A+C+L ++ + +RPFGV+LLIAG D +G LY TDPSG + A AIG+ S L++ Y D+ + E +AL L +E +T + NV++A Sbjct: 52 EKRKISALFDSSSLEKIYLIDEHVAASPSGLLADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQY---TQFGGARPFGVALLIAGVDRHGARLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYKFDMEMGECIELALKALASAVE--ITDSANVEVA 213
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.596e-26 Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = 3 Query: 6 EKLFTSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE-KVTPNNVDIARV 509 EK TS LL+ S S EK+ +ID H+ CA++G+++DA L+ AR+ Q + SY EP+ VE Q+LCD + + RPFGVS L AG D+ +G LY +DPSG + A A+G++S+ A S L++ Y LT +EA +AL +L + M+ +T +++A V Sbjct: 48 EKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEV 215
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.596e-26 Identity = 68/171 (39.77%), Postives = 103/171 (60.23%), Query Frame = 3 Query: 6 EKLFTSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE-KVTPNNVDIARV 509 EK TS LL+ S S EK+ +ID H+ CA++G+++DA L+ AR+ Q + SY EP+ VE Q+LCD + + RPFGVS L AG D+ +G LY +DPSG + A A+G++S+ A S L++ Y LT +EA +AL +L + M+ +T +++A V Sbjct: 48 EKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGLTREEAVALALKVLSKTMDSTSLTAEKLELAEV 215
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.697e-26 Identity = 67/193 (34.72%), Postives = 109/193 (56.48%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPS-LYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSIL----KQVMEEK-----VTPNNVDIARVAPTYHLYTPSEVEAV 554 EK F PL++ ++KI +ID+HIG A +G+ D R L+++ARV T HR YGEP VE + + D+ + + RPFGV+L+ AG + +G + +Y TDP G ++ A AIGS + A+ ++ Y D++L+EA +AL IL ++ +E+K P+ V++A + ++T E V Sbjct: 55 EKRFIGPLVDIDDIDKIYKIDDHIGVAFAGMGGDGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAY---TQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSDMSLEEATKLALKILYAIIRKTVEDKEKAIATLPDQVELAYITVKERMFTKMTKEQV 244 The following BLAST results are available for this feature:
BLAST of FC925345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925345 ID=FC925345; Name=FC925345; organism=Citrus clementina; type=EST; length=649bpback to top |