FC925345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.135e-26 Identity = 60/167 (35.93%), Postives = 99/167 (59.28%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVME--EKVTPNNVDI 500 EK S LL+ S+EK+ +D+H+GC+ +GL +D R L+++AR + HR Y EP++++ T+ + D+ + + RPFGV+L++ G D L+ T+PSG F A AIG A L++ Y +DL+++E +AL+ LK ++ EK+ P NV+I Sbjct: 53 EKKKASQLLDVDSIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMY---TQHGGVRPFGVALIVGGVDRGVTKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKEDLSVEETILLALNALKVTLKPGEKLGPGNVEI 216
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.135e-26 Identity = 67/171 (39.18%), Postives = 103/171 (60.23%), Query Frame = 3 Query: 6 EKLFTSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE-KVTPNNVDIARV 509 EK TS LL+ S S EK+ +ID H+ CA++G+++DA L+ AR+ Q + SY EP+ VE Q+LCD + + RPFGVS L AG D+ +G LY +DPSG + A A+G++S+ A S L++ Y +T +EA +AL +L + M+ +T +++A V Sbjct: 48 EKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEV 215
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSI (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica GN=OsI_021120 PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 6.135e-26 Identity = 67/171 (39.18%), Postives = 103/171 (60.23%), Query Frame = 3 Query: 6 EKLFTSPLLEPS-SVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDE-NGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEE-KVTPNNVDIARV 509 EK TS LL+ S S EK+ +ID H+ CA++G+++DA L+ AR+ Q + SY EP+ VE Q+LCD + + RPFGVS L AG D+ +G LY +DPSG + A A+G++S+ A S L++ Y +T +EA +AL +L + M+ +T +++A V Sbjct: 48 EKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGY---TQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRDGMTREEAVALALKVLSKTMDSTSLTAEKLELAEV 215
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA5_ENCCU (Probable proteasome subunit alpha type-5 OS=Encephalitozoon cuniculi GN=PUP2 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.012e-26 Identity = 73/187 (39.04%), Postives = 104/187 (55.61%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESM--SRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVAPTYHLY-TPSEVEAVI 557 EK S L P SV K +I +HI SG+ D +T+V+ +R +H YGE ++VE + L L+LRFGE DE M RPFGVSL+IAG D P LY DPSG++ AKAIGS E + L+ +Y + L ++ L L +VM++K++ +NV++ V + TP EV + Sbjct: 47 EKKILSTLQNPKSVVKHYKIYDHIVLGFSGISGDTKTIVKRSRDFCISHTHMYGENISVERLLKYLSSLSLRFGEEDEAKMIFRRPFGVSLIIAGFDTE-PRLYSLDPSGSYISYKAKAIGSGHEVVEGILENEYEEYSGLDQSLRKVLCTLSKVMKDKISKDNVEVVVVTQEESKFLTPEEVSVYL 232
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25 Identity = 70/189 (37.04%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEAVIN 560 V+K SPLLE SSVEK+ +ID+H+G A +G +ADAR LV+ AR ++Q R Y EP+ V + T+++ D ++ + +RPFGV+LLIAG + P L+ TDPSGT + A AIGS+ L+++Y+ L++ + +AL L + E+ ++ + V + V TY E ++ I+ Sbjct: 52 VDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQY---TQVGGARPFGVALLIAGVEGGEPRLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNEGREDALSGDGVGVGIVDADTGTYRELAADESQSYID 237
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25 Identity = 70/189 (37.04%), Postives = 111/189 (58.73%), Query Frame = 3 Query: 3 VEKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARV---APTYHLYTPSEVEAVIN 560 V+K SPLLE SSVEK+ +ID+H+G A +G +ADAR LV+ AR ++Q R Y EP+ V + T+++ D ++ + +RPFGV+LLIAG + P L+ TDPSGT + A AIGS+ L+++Y+ L++ + +AL L + E+ ++ + V + V TY E ++ I+ Sbjct: 52 VDKQTRSPLLEGSSVEKLHKIDDHVGAASAGHVADARQLVDFARQQSQVERVRYDEPIGVRTLTKSVTDHIQQY---TQVGGARPFGVALLIAGVEGGEPRLFETDPSGTSNEWKAVAIGSNRGDIQEFLEDEYDAGLSVDDGIDLALRALNEGREDALSGDGVGVGIVDADTGTYRELAADESQSYID 237
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 114.775 bits (286), Expect = 3.976e-25 Identity = 65/183 (35.52%), Postives = 103/183 (56.28%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA--RVAPTYHLYTPSEVE 548 +K S L+E +S+EKI ID+++ SGL+ADAR LV+ AR+ Q + +YG + +E+ + + D ++ + RP+GVSL+ AG D+ GP L+ DP+GT + A AIGS + S L+ +Y ++L +EA T+ + LK +EE +IA V Y +Y EV+ Sbjct: 51 DKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQY---TQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGNKYRIYDQEEVK 230
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.193e-25 Identity = 64/183 (34.97%), Postives = 104/183 (56.83%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIA--RVAPTYHLYTPSEVE 548 +K S L+E +S+EKI ID+++ SGL+ADAR L++ AR+ Q + +YG + +E+ + + D ++ + RP+GVSL+ AG D+ GP L+ DP+GT + A AIGS + S L+++Y + L+ +EA T+ + LK +EE +IA V Y +Y EV+ Sbjct: 51 DKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQY---TQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASLEEGEELKAPEIASITVGSKYRIYGAEEVK 230
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.511e-24 Identity = 62/183 (33.88%), Postives = 105/183 (57.38%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA--PTYHLYTPSEVE 548 EK S L++ +SV+KI + +IG SG+ D R LV +R + + + Y EP+ V TQ + + A E + RPFGVSLL+AG D+ GP LY DPSG+++ A A+G + A + L+++Y +D+ L +A A+ LK+ E +++ N++I ++ + + TP+E++ Sbjct: 49 EKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPV---TQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEIGKIGTDKVFRVLTPAEID 228
BLAST of FC925345 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.511e-24 Identity = 62/183 (33.88%), Postives = 105/183 (57.38%), Query Frame = 3 Query: 6 EKLFTSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGSDENGPSLYYTDPSGTFWQCNAKAIGSSSEGADSSLQEQYNKDLTLQEAETIALSILKQVMEEKVTPNNVDIARVA--PTYHLYTPSEVE 548 EK S L++ +SV+KI + +IG SG+ D R LV +R + + + Y EP+ V TQ + + A E + RPFGVSLL+AG D+ GP LY DPSG+++ A A+G + A + L+++Y +D+ L +A A+ LK+ E +++ N++I ++ + + TP+E++ Sbjct: 49 EKKLPSILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPV---TQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMELDDAIHTAILTLKEGFEGEISSKNIEIGKIGADKVFRVLTPAEID 228 The following BLAST results are available for this feature:
BLAST of FC925345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 174
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925345 ID=FC925345; Name=FC925345; organism=Citrus clementina; type=EST; length=649bpback to top |