FC925349

Overview
NameFC925349
Unique NameFC925349
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length497
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C52_ORYSJ (Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 3.529e-15
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 2 
Query:  101 GYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEE 280
            GY   +GK   +MED+   +  +  D ++ LF IFDGH G   A YL+ HLF+N++K  E
Sbjct:  231 GYSSFRGK-RASMEDFYDIKSSKIDDKQISLFGIFDGHGGSRAAEYLKEHLFENLMKHPE 289

HSP 2 Score: 50.0618 bits (118), Expect = 3.529e-15
Identity = 29/60 (48.33%), Postives = 39/60 (65.00%), Query Frame = 3 
Query:  321 KQPDFWTDTESAIRRAYHMTDTKILE-QAFVLGKGGSTAVTAILINGQKLVVANVGDSRA 497
            K P+F T+T+ AI   Y  TD++ L+ ++      GSTA TA+L+ G  L VANVGDSRA
Sbjct:  286 KHPEFMTNTKLAISETYKKTDSEFLDSESHTHRDDGSTASTAVLV-GNHLYVANVGDSRA 344
[Close]
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C13_ORYSJ (Probable protein phosphatase 2C 13 OS=Oryza sativa subsp. japonica GN=Os02g0255100 PE=2 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 7.803e-15
Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 3 
Query:  321 KQPDFWTDTESAIRRAYHMTDTKILE-QAFVLGKGGSTAVTAILINGQKLVVANVGDSRA 497
            K P+F TDT+ AI   Y  TDT  LE ++      GSTA TA+L+ G  L VANVGDSRA
Sbjct:  168 KHPEFLTDTKLAISETYQKTDTDFLESESNAFRDDGSTASTAVLVGGH-LYVANVGDSRA 226

HSP 2 Score: 45.4394 bits (106), Expect = 7.803e-15
Identity = 28/83 (33.73%), Postives = 40/83 (48.19%), Query Frame = 2 
Query:   32 AGFCTSALDTGKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEE 280
            AG+ +       GK K       GY   +GK    MED+   +  +     + LF +FDGH G   A YL+ +LF+N+LK  E
Sbjct:   96 AGYASGGWAREDGKLKC------GYSSFRGK-RATMEDFYDVKLTEIDGQAVSLFGVFDGHGGPRAAEYLKENLFENLLKHPE 171
[Close]
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 50.0618 bits (118), Expect = 1.013e-14
Identity = 24/57 (42.11%), Postives = 36/57 (63.16%), Query Frame = 2 
Query:  101 GYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILK 271
            GY   +G+  + MED+   +  +  DN++ LF IFDGH G   A +L+ HLF+N+LK
Sbjct:  117 GYSSFRGRRAN-MEDFYDIKSSKVDDNQINLFGIFDGHGGSHAAEHLKKHLFENLLK 172

HSP 2 Score: 49.6766 bits (117), Expect = 1.013e-14
Identity = 29/59 (49.15%), Postives = 37/59 (62.71%), Query Frame = 3 
Query:  321 KQPDFWTDTESAIRRAYHMTDTKILE-QAFVLGKGGSTAVTAILINGQKLVVANVGDSR 494
            K P F TDT+SAI   Y  TD+  L+ +  +  + GSTA TAI + G  + VANVGDSR
Sbjct:  172 KHPSFITDTKSAISETYRKTDSDFLDAETNINREDGSTASTAIFV-GNHIYVANVGDSR 229
[Close]
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 1.318e-14
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 3 
Query:  327 PDFWTDTESAIRRAYHMTDTKILEQAFVLGK-GGSTAVTAILINGQKLVVANVGDSRA 497
            P F +DT+SAI  AY+ TD+++L+      +  GSTA TAIL+ G +LVVANVGDSRA
Sbjct:   92 PKFISDTKSAITDAYNHTDSELLKSENSHNRDAGSTASTAILV-GDRLVVANVGDSRA 148

HSP 2 Score: 46.2098 bits (108), Expect = 1.318e-14
Identity = 28/80 (35.00%), Postives = 44/80 (55.00%), Query Frame = 2 
Query:   59 TGKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEEHCEYIS 298
            +G G S+  K  ++GY    GK + +MED+  +         +GLF +FDGH G   A Y++ HLF N++    H ++IS
Sbjct:   22 SGGGLSQNGKF-SYGYASSAGKRS-SMEDFFETRIDGINGEIVGLFGVFDGHGGARAAEYVKRHLFSNLI---THPKFIS 96
[Close]
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C45_ORYSJ (Probable protein phosphatase 2C 45 OS=Oryza sativa subsp. japonica GN=Os04g0659500 PE=2 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 2.241e-14
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = 3 
Query:  321 KQPDFWTDTESAIRRAYHMTDTKILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSRA 497
            + P F +DT+ AI  AY  TD++ LE      + GSTA TA+L+ G +L VANVGDSRA
Sbjct:   84 RHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV-GDRLFVANVGDSRA 141

HSP 2 Score: 45.8246 bits (107), Expect = 2.241e-14
Identity = 31/94 (32.98%), Postives = 50/94 (53.19%), Query Frame = 2 
Query:   35 GFCTSALDT------GKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEEHCEYIS 298
            G+ +S + T      G G S+  K  ++GY    GK   +MED+  +         +GLF +FDGH G  VA Y++ +LF ++L+   H ++IS
Sbjct:    2 GYLSSVIPTDGSPVSGGGLSQNGKF-SYGYASSPGK-RASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLR---HPKFIS 90
[Close]
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 1.063e-13
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 3 
Query:  327 PDFWTDTESAIRRAYHMTDTKILEQAFVLGK-GGSTAVTAILINGQKLVVANVGDSRA 497
            P F +DT+SAI  AY  TD+++L+      +  GSTA TAIL+ G +L+VANVGDSRA
Sbjct:   92 PKFISDTKSAIADAYTHTDSELLKSENSHTRDAGSTASTAILV-GDRLLVANVGDSRA 148

HSP 2 Score: 46.2098 bits (108), Expect = 1.063e-13
Identity = 28/80 (35.00%), Postives = 44/80 (55.00%), Query Frame = 2 
Query:   59 TGKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEEHCEYIS 298
            +G G S+  K  ++GY    GK + +MED+  +         +GLF +FDGH G   A Y++ HLF N++    H ++IS
Sbjct:   22 SGGGLSQNGKF-SYGYASSAGKRS-SMEDFFETRIDGIDGEIVGLFGVFDGHGGSRAAEYVKRHLFSNLI---THPKFIS 96
[Close]
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C59_ARATH (Probable protein phosphatase 2C 59 OS=Arabidopsis thaliana GN=WIN2 PE=1 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 1.074e-13
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 3 
Query:  321 KQPDFWTDTESAIRRAYHMTDTKILEQAFVLGK-GGSTAVTAILINGQKLVVANVGDSRA 497
            + P F +DT +AI  AY+ TD++ L+      +  GSTA TAIL+ G +L+VANVGDSRA
Sbjct:   90 RHPKFISDTTAAIADAYNQTDSEFLKSENSQNRDAGSTASTAILV-GDRLLVANVGDSRA 148

HSP 2 Score: 45.0542 bits (105), Expect = 1.074e-13
Identity = 27/80 (33.75%), Postives = 46/80 (57.50%), Query Frame = 2 
Query:   59 TGKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEEHCEYIS 298
            +G G S+  K  ++GY    GK + +MED+  +     +   +GLF +FDGH G   A Y++ +LF N+++   H ++IS
Sbjct:   22 SGGGLSQNGKF-SYGYASSPGKRS-SMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIR---HPKFIS 96
[Close]
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C11_ARATH (Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1)

HSP 1 Score: 48.521 bits (114), Expect = 2.343e-13
Identity = 29/56 (51.79%), Postives = 37/56 (66.07%), Query Frame = 3 
Query:  330 DFWTDTESAIRRAYHMTDTK-ILEQAFVLGKGGSTAVTAILINGQKLVVANVGDSR 494
            DF +DT+ AI   +  TD + ++E+A      GSTA TA LI G KL+VANVGDSR
Sbjct:  183 DFISDTKKAIVEVFKQTDEEYLIEEAGQPKNAGSTAATAFLI-GDKLIVANVGDSR 237

HSP 2 Score: 46.595 bits (109), Expect = 2.343e-13
Identity = 27/82 (32.93%), Postives = 43/82 (52.44%), Query Frame = 2 
Query:   47 SALDTGKGKSKMSKLIT----HGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILKEEE 280
            +AL +G G S ++ + T    +GY  +KGK    MEDY  +         +  F +FDGH G   A YL+ +LF N++  ++
Sbjct:  103 NALFSGGGISFLAGVRTVKFSYGYSSLKGK-RATMEDYFETRISDVNGQMVAFFGVFDGHGGARTAEYLKNNLFKNLVSHDD 183
[Close]
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C59_ORYSJ (Probable protein phosphatase 2C 59 OS=Oryza sativa subsp. japonica GN=Os06g0698300 PE=2 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 3.054e-13
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 3 
Query:  321 KQPDFWTDTESAIRRAYHMTDTKILEQAFVLGK-GGSTAVTAILINGQKLVVANVGDSRA 497
            K P  ++DT+SAI   Y  TD+++L+      +  GSTA TAIL+ G +L+VANVGDSRA
Sbjct:  121 KHPKLFSDTKSAIAETYTSTDSELLKAETSHNRDAGSTASTAILV-GDRLLVANVGDSRA 179

HSP 2 Score: 43.1282 bits (100), Expect = 3.054e-13
Identity = 26/80 (32.50%), Postives = 42/80 (52.50%), Query Frame = 2 
Query:   32 AGFCTSALDTGKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILK 271
            AG    +  +G G S   K  ++GY    GK + +MED+  +         +GLF +FDGH G   A +++ +LF N++K
Sbjct:   44 AGEAAGSPGSGGGFSANGKF-SYGYASSPGKRS-SMEDFYDTRIDGVDGETVGLFGVFDGHGGARAAEFVKQNLFTNLIK 121
[Close]
BLAST of FC925349 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 45.4394 bits (106), Expect = 5.388e-12
Identity = 30/61 (49.18%), Postives = 35/61 (57.38%), Query Frame = 3 
Query:  321 KQPDFWTDTESAIRRAYHMTDTKILEQAFV--LGKGGSTAVTAILINGQKLVVANVGDSRA 497
            K P F  DT+ AI + +  TD   L+          GSTAV AILI G +L VANVGDSRA
Sbjct:  179 KHPKFLKDTKLAINQTFLKTDADFLQSISSDRYRDDGSTAVAAILI-GNRLYVANVGDSRA 238

HSP 2 Score: 45.0542 bits (105), Expect = 5.388e-12
Identity = 28/70 (40.00%), Postives = 38/70 (54.29%), Query Frame = 2 
Query:   62 GKGKSKMSKLITHGYHLVKGKSNHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVANYLQTHLFDNILK 271
            G G SK  KL + GY   +G+   +MED L  +        + LF +FDGH G   A YL+ HLF N++K
Sbjct:  112 GVGCSKDGKL-SWGYSSFQGR-RPSMEDRLSIKSTTVNGETVSLFGVFDGHGGPRAAEYLKKHLFKNLVK 179
The following BLAST results are available for this feature:
BLAST of FC925349 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
P2C52_ORYSJ3.529e-1541.67Probable protein phosphatase 2C 52 OS=Oryza sativa... [more]
P2C13_ORYSJ7.803e-1553.33Probable protein phosphatase 2C 13 OS=Oryza sativa... [more]
P2C07_ORYSJ1.013e-1442.11Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C69_ARATH1.318e-1455.17Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C45_ORYSJ2.241e-1450.85Probable protein phosphatase 2C 45 OS=Oryza sativa... [more]
P2C71_ARATH1.063e-1353.45Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]
P2C59_ARATH1.074e-1350.00Probable protein phosphatase 2C 59 OS=Arabidopsis ... [more]
P2C11_ARATH2.343e-1351.79Probable protein phosphatase 2C 11 OS=Arabidopsis ... [more]
P2C59_ORYSJ3.054e-1350.00Probable protein phosphatase 2C 59 OS=Oryza sativa... [more]
P2C55_ORYSJ5.388e-1249.18Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YG15FM1 TF Citrus clementina cDNA clone KN0AAP3YG15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925349 ID=FC925349; Name=FC925349; organism=Citrus clementina; type=EST; length=497bp
CAAAGAAATTCTCCTGAAGATGAAGGTTAAGGCTGGGTTTTGTACATCTG
CATTGGACACAGGGAAAGGTAAAAGCAAAATGTCGAAACTTATCACGCAT
GGATATCATCTAGTGAAGGGAAAATCAAACCATGCCATGGAAGATTATCT
CGTTTCAGAATTCAAGCAAGAAAAAGACAATGAGCTGGGCTTATTTGCCA
TATTTGATGGCCATTTGGGCCATGATGTAGCAAATTACTTGCAAACTCAC
CTGTTTGATAATATTTTGAAAGAGGAGGAACATTGTGAATATATATCTAT
ATACTTTCTTTATTTTCTGCAAGCAGCCTGACTTTTGGACTGATACGGAA
AGTGCAATCAGGAGAGCTTATCATATGACAGACACTAAGATATTGGAGCA
AGCATTTGTCCTGGGAAAAGGGGGATCAACAGCAGTAACAGCAATTCTTA
TTAATGGTCAGAAACTAGTAGTTGCAAATGTGGGAGATTCTCGGGCT
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