FC925351

Overview
NameFC925351
Unique NameFC925351
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length645
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14687 contig Ccv1_Contig14687:621..1265. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925351 vs. ExPASy Swiss-Prot
Match: SNF1_CANAL (Carbon catabolite-derepressing protein kinase OS=Candida albicans GN=SNF1 PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 6.732e-17
Identity = 43/114 (37.72%), Postives = 70/114 (61.40%), Query Frame = 2
Query:    5 DIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFEADKSSKQPETLNAFHIISLSEGFD 346
            D+WS GVILYV+L G LPF D+ I ++++KI  G +  P + S+ A+ L+T++L  NP +RI I +IME  WFK+  P  ++     +   +K+SK     +    +S++ G+D
Sbjct:  233 DVWSAGVILYVMLCGRLPFDDEFIPALFKKISNGVYTLPNYLSAGAKHLLTRMLVVNPLNRITIHEIMEDDWFKQDMPDYLLPP---DLSKNKNSKIDVDEDVIRALSVTMGYD 343          
BLAST of FC925351 vs. ExPASy Swiss-Prot
Match: SNF1_CANTR (Carbon catabolite-derepressing protein kinase OS=Candida tropicalis GN=SNF1 PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.959e-16
Identity = 42/114 (36.84%), Postives = 69/114 (60.53%), Query Frame = 2
Query:    5 DIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFEADKSSKQPETLNAFHIISLSEGFD 346
            D+WS GVILYV+L G LPF D+ I ++++KI  G +  P + S  A+ L+T++L  NP +RI I +IME  WFK+  P  ++     + +  K     + ++A   +S++ G+D
Sbjct:  231 DVWSSGVILYVMLCGRLPFDDEFIPALFKKISNGVYTLPNYLSPGAKHLLTRMLVVNPLNRITIHEIMEDEWFKQDMPDYLLPPDLSKIKTSKIDIDEDVISA---LSVTMGYD 341          
BLAST of FC925351 vs. ExPASy Swiss-Prot
Match: Y7165_DICDI (Probable serine/threonine-protein kinase DDB_G0277165 OS=Dictyostelium discoideum GN=DDB_G0277165 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.443e-16
Identity = 37/74 (50.00%), Postives = 50/74 (67.57%), Query Frame = 2
Query:    2 ADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWF 223
            AD+WSCGVILY LL G LPF D+NI  +  K+  G F  PP+   +A+ L+TK+L  +P+ RI+I +I E  WF
Sbjct:  189 ADVWSCGVILYALLTGKLPFDDENIRRLLNKVKNGAFSMPPYIHKDAQDLLTKMLTVDPSKRISIKEIKEHPWF 262          
BLAST of FC925351 vs. ExPASy Swiss-Prot
Match: MELK_MOUSE (Maternal embryonic leucine zipper kinase OS=Mus musculus GN=Melk PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.694e-15
Identity = 31/73 (42.47%), Postives = 51/73 (69.86%), Query Frame = 2
Query:    2 ADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSW 220
            AD+WS G++LYVL+ GFLPF DDN++++Y+KI RG ++ P W S  +  L+ ++L  +P  RI++  ++   W
Sbjct:  190 ADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYEVPKWLSPSSILLLQQMLQVDPKKRISMRNLLNHPW 262          
BLAST of FC925351 vs. ExPASy Swiss-Prot
Match: MELK_HUMAN (Maternal embryonic leucine zipper kinase OS=Homo sapiens GN=MELK PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 3.694e-15
Identity = 35/99 (35.35%), Postives = 57/99 (57.58%), Query Frame = 2
Query:    2 ADIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQEMEFEADKSSKQP 298
            AD+WS G++LYVL+ GFLPF DDN++++Y+KI RG +  P W S  +  L+ ++L  +P  RI++  ++   W            Q+  +  +  SK P
Sbjct:  190 ADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWI----------MQDYNYPVEWQSKNP 278          
BLAST of FC925351 vs. ExPASy Swiss-Prot
Match: KIN11_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.825e-15
Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    5 DIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAPK 241
            D+WSCGVILY LL G LPF D+NI ++++KI  G +  P   SSEAR LI ++L  +P  RI I +I +  WF+   P+
Sbjct:  200 DVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSEARDLIPRMLIVDPVKRITIPEIRQHRWFQTHLPR 278          
BLAST of FC925351 vs. ExPASy Swiss-Prot
Match: RKIN1_SECCE (Carbon catabolite-derepressing protein kinase OS=Secale cereale GN=RKIN1 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.404e-14
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 2
Query:    5 DIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAPK 241
            D+WSCGVILY LL G +PF DDNI ++++KI  G +  P + S   R LI+++L  +P  RI I +I + SWF+   P+
Sbjct:  197 DVWSCGVILYALLCGAVPFDDDNIPNLFKKIKGGTYILPIYLSDLVRDLISRMLIVDPMKRITIGEIRKHSWFQNRLPR 275          
BLAST of FC925351 vs. ExPASy Swiss-Prot
Match: SNF1_CANGA (Carbon catabolite-derepressing protein kinase OS=Candida glabrata GN=SNF1 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 9.099e-14
Identity = 42/120 (35.00%), Postives = 72/120 (60.00%), Query Frame = 2
Query:    5 DIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAPKVVI---TKQEMEFEADKSSKQ-PETLNAFHIISLSE--GFD 346
            D+WSCGVILYV+L   LPF D++I  +++ I  G +  P + S  A  LI ++L  NP +RI+I +IM+  WFK    + ++    KQ+ +F     +++  E ++   +++LS+  G+D
Sbjct:  218 DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGASDLIKRMLIVNPLNRISIHEIMQDEWFKVDLAEYLVPQDLKQQEQFNKKSGNEENVEEIDDEMVVTLSKTMGYD 337          
BLAST of FC925351 vs. ExPASy Swiss-Prot
Match: AAPK1_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragments) OS=Sus scrofa GN=PRKAA1 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 9.099e-14
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 2
Query:    5 DIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAPKVVITKQ---EMEFEADKSSKQPETLNAFHIISLSEGFDLS 352
            DIWS GVILY LL G LPF DD++ ++++KI  G F  P + +     L+  +L  +P  R  I  I E  WFK+  PK +  +          D++ KQ     A+H+I  +  F L+
Sbjct:  157 DIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSXTMIDDEALKQDPLAVAYHLIIDNRDFYLA 275          
BLAST of FC925351 vs. ExPASy Swiss-Prot
Match: KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.188e-13
Identity = 35/79 (44.30%), Postives = 50/79 (63.29%), Query Frame = 2
Query:    5 DIWSCGVILYVLLAGFLPFQDDNIVSMYRKIYRGDFKCPPWFSSEARRLITKLLDPNPNSRIAISKIMESSWFKKSAPK 241
            D+WSCGVILY LL G LPF D+NI ++++KI  G +  P   S  AR LI ++L  +P  R+ I +I +  WF+   P+
Sbjct:  222 DVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRVTIPEIRQHPWFQAHLPR 300          
The following BLAST results are available for this feature:
BLAST of FC925351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
SNF1_CANAL6.732e-1737.72Carbon catabolite-derepressing protein kinase OS=C... [more]
SNF1_CANTR1.959e-1636.84Carbon catabolite-derepressing protein kinase OS=C... [more]
Y7165_DICDI7.443e-1650.00Probable serine/threonine-protein kinase DDB_G0277... [more]
MELK_MOUSE3.694e-1542.47Maternal embryonic leucine zipper kinase OS=Mus mu... [more]
MELK_HUMAN3.694e-1535.35Maternal embryonic leucine zipper kinase OS=Homo s... [more]
KIN11_ARATH4.825e-1548.10SNF1-related protein kinase catalytic subunit alph... [more]
RKIN1_SECCE1.404e-1445.57Carbon catabolite-derepressing protein kinase OS=S... [more]
SNF1_CANGA9.099e-1435.00Carbon catabolite-derepressing protein kinase OS=C... [more]
AAPK1_PIG9.099e-1435.295'-AMP-activated protein kinase catalytic subunit ... [more]
KIN10_ARATH1.188e-1344.30SNF1-related protein kinase catalytic subunit alph... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YG18FM1 TF Citrus clementina cDNA clone KN0AAP3YG18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925351 ID=FC925351; Name=FC925351; organism=Citrus clementina; type=EST; length=645bp
GGCCGATATTTGGTCTTGTGGGGTCATTCTTTACGTGTTGTTAGCAGGTT
TCTTGCCATTCCAGGATGATAATATCGTGTCCATGTATCGGAAGATTTAC
AGGGGAGATTTCAAGTGCCCGCCTTGGTTTTCATCTGAAGCGAGGAGGTT
GATCACCAAGCTTCTCGATCCAAACCCTAACTCAAGAATCGCTATTTCAA
AGATCATGGAGTCTTCTTGGTTCAAAAAGTCTGCTCCCAAGGTTGTGATA
ACTAAGCAAGAGATGGAATTTGAAGCTGACAAGTCATCAAAGCAACCTGA
GACTCTAAATGCGTTTCATATCATCTCTTTGTCGGAAGGGTTTGATTTGT
CACCTTTGTTTGAGGAGAAAAAGAGAGCGGAAAGAGAGGAGCTGAGATTT
GCAACCACGAGGCCTGCAAGCAGTGTGATCTCAAGATTTGAAGAGGTGGC
CAAGGCCGTTAAGTTTAATGTCAAAACGAGCGAGTCAAGAGTCAGATTAC
AAGGCCAAGAAAGCGGAAGGAAAGGCAAATTGGCTATCAATGCTGACATC
TTTGCCGTTACACCGTCGCTTTTGGTGGTGGAAGTGAAGAAACATAATGG
TGATACATTGGAGTACAATCAATTCTGTAACAACGAGCTTCGGCC
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