FC925354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXH_CHLRE (Thioredoxin H-type OS=Chlamydomonas reinhardtii GN=TRXH PE=1 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 4.518e-16 Identity = 41/83 (49.40%), Postives = 55/83 (66.27%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELAN-ILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 262 VDFTA+WCGPC+ IAP L+N V+FLKVDVD + +VA + AMPTF K+G D +VGA +++L+ +AKH A Sbjct: 30 VDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKHAA 112
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_OPHHA (Thioredoxin OS=Ophiophagus hannah GN=TXN PE=3 SV=3) HSP 1 Score: 83.1889 bits (204), Expect = 4.518e-16 Identity = 36/85 (42.35%), Postives = 57/85 (67.06%), Query Frame = 2 Query: 5 QLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHL 259 +L VDF+A+WCGPC+ I PF + P+V+F+++DVD+ + VA+ V+ MPTF F K + V + GA KE+L++ I K++ Sbjct: 21 KLIVVDFSATWCGPCKMIKPFFHSMVEKYPDVVFIEIDVDDAQDVASHCDVKCMPTFQFYKNNEKVHEFSGANKEKLEEAIKKYM 105
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_PONAB (Thioredoxin OS=Pongo abelii GN=TXN PE=3 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 5.901e-16 Identity = 40/82 (48.78%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 QLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTF-MFLKEGKIVDKVVGAKKEELQQTI 247 +L VDF+A+WCGPC+ I PF L+ NV+FL+VDVD+ + VA++ V+ MPTF F K+G+ V + GA KE+L+ TI Sbjct: 21 KLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKCMPTFQFFFKKGQKVGEFSGANKEKLEATI 102
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_GEOCY (Thioredoxin OS=Geodia cydonium GN=THIO PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.315e-15 Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 5 QLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGK-IVDKVVGAKKEELQQTIAKH 256 +L +DFTASWCGPC+ IAP E+A P+V+F KVDVDE A ++AMPTF F K GK + D V GA + L++ I K+ Sbjct: 21 KLVVIDFTASWCGPCQRIAPKYVEMAKEFPDVIFYKVDVDENDETAEAEKIQAMPTFKFYKSGKALSDYVQGANEAGLREKIKKN 105
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO1_CAEEL (Thioredoxin-1 OS=Caenorhabditis elegans GN=trx-1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.315e-15 Identity = 34/87 (39.08%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 2 KQLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 262 +++ +DF A+WCGPC+ IAP ELA ++F KVDVDE + + + + V+ MPTF+F K G ++ + G ++EL+Q + +H++ Sbjct: 27 EKIIILDFYATWCGPCKAIAPLYKELATTHKGIIFCKVDVDEAEDLCSKYDVKMMPTFIFTKNGDAIEALEGCVEDELRQKVLEHVS 113
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRX1_YEAST (Thioredoxin-1 OS=Saccharomyces cerevisiae GN=TRX1 PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 4.995e-15 Identity = 40/82 (48.78%), Postives = 50/82 (60.98%), Query Frame = 2 Query: 5 QLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIA 250 +L VDF A+WCGPC+ IAP + + + P F K+DVDEL VA V AMPT + K GK V KVVGA ++Q IA Sbjct: 19 KLVVVDFYATWCGPCKMIAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVAKVVGANPAAIKQAIA 100
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRX1_SCHPO (Thioredoxin-1 OS=Schizosaccharomyces pombe GN=trx1 PE=2 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 4.995e-15 Identity = 35/85 (41.18%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 5 QLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHL 259 +L VDF A+WCGPC+ IAP + +N + F+KVDVD+L +A + V AMP+F K G+ ++++VGA +L+ +I +L Sbjct: 19 KLVVVDFFATWCGPCKAIAPKFEQFSNTYSDATFIKVDVDQLSEIAAEAGVHAMPSFFLYKNGEKIEEIVGANPAKLEASIKANL 103
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_PLAF7 (Thioredoxin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0545 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.995e-15 Identity = 38/86 (44.19%), Postives = 51/86 (59.30%), Query Frame = 2 Query: 5 QLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 262 +L VDF A WCGPC+ IAPF E + ++F+KVDVDE+ V + +MPTF K G VD ++GA L+Q I K+ A Sbjct: 19 ELVIVDFFAEWCGPCKRIAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENITSMPTFKVYKNGSSVDTLLGANDSALKQLIEKYAA 104
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO2_DROME (Thioredoxin-2 OS=Drosophila melanogaster GN=Trx-2 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 6.524e-15 Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 2 Query: 5 QLPFVDFTASWCGPCRFIAPFLAELAN-ILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHL 259 +L +DF A+WCGPC+ I+P L EL+ NV+ LKVDVDE + +A ++ + +MPTF+FLK G V++ GA + L+ I ++ Sbjct: 29 KLVVLDFFATWCGPCKMISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDVIKANI 114
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRX2_YEAST (Thioredoxin-2 OS=Saccharomyces cerevisiae GN=TRX2 PE=1 SV=3) HSP 1 Score: 78.9518 bits (193), Expect = 8.521e-15 Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 5 QLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHL 259 +L VDF A+WCGPC+ IAP + + A + F K+DVDE+ VA V +MPT +F K GK V +VVGA ++Q IA ++ Sbjct: 20 KLVVVDFFATWCGPCKMIAPMIEKFAEQYSDAAFYKLDVDEVSDVAQKAEVSSMPTLIFYKGGKEVTRVVGANPAAIKQAIASNV 104 The following BLAST results are available for this feature:
BLAST of FC925354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925354 ID=FC925354; Name=FC925354; organism=Citrus clementina; type=EST; length=308bpback to top |