FC925354
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_COPCM (Thioredoxin OS=Coprinus comatus PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.106e-13 Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELANILP--NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKHLA 262 +DF A+WCGPCR I+P + + N++F KVDVD ++ + + AMPTF K+G+ +D++VGA L+ + K LA Sbjct: 23 IDFWATWCGPCRVISPIFEKFSEKYGANNIVFAKVDVDTASDISEEAKIRAMPTFQVYKDGQKIDELVGANPTALESLVQKSLA 106
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_CHLPN (Thioredoxin OS=Chlamydia pneumoniae GN=trxA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.106e-13 Identity = 38/84 (45.24%), Postives = 49/84 (58.33%), Query Frame = 2 Query: 8 LPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQTIAKH 256 L VDF A WCGPCR + P L LA LP+V K+++DE A + V ++PT + K+G V +VVG K KE L I KH Sbjct: 18 LVLVDFFAEWCGPCRMLTPILENLAAELPHVTIGKINIDENSKPAETYEVSSIPTLILFKDGNEVARVVGLKDKEFLTNLINKH 101
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO1_ANASP (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7120) GN=trxA PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.106e-13 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELANILP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHL 259 VDF A WCGPCR +AP + E+A + +KV+ DE VA+ + + ++PT M K G+ VD VVGA K L QT+ KHL Sbjct: 25 VDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO1_ANASO (Thioredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=trxA PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 6.106e-13 Identity = 38/83 (45.78%), Postives = 51/83 (61.45%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELANILP-NVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHL 259 VDF A WCGPCR +AP + E+A + +KV+ DE VA+ + + ++PT M K G+ VD VVGA K L QT+ KHL Sbjct: 25 VDFWAPWCGPCRMVAPVVDEIAQQYEGKIKVVKVNTDENPQVASQYGIRSIPTLMIFKGGQKVDMVVGAVPKTTLSQTLEKHL 107
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_MYCGA (Thioredoxin OS=Mycoplasma gallisepticum GN=trxA PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 2.320e-12 Identity = 29/78 (37.18%), Postives = 52/78 (66.67%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVG-AKKEELQQTI 247 VDF A+WCGPC+ + P E+A + F+KVDVD+ +++++ + ++PT +F ++GK+ DK +G K EL++ + Sbjct: 22 VDFYANWCGPCKILGPIFEEVAQDKKDWTFVKVDVDQANEISSEYEIRSIPTVIFFQDGKMADKRIGFIPKNELKELL 99
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_CYAME (Thioredoxin OS=Cyanidioschyzon merolae GN=trxA PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 2.320e-12 Identity = 38/87 (43.68%), Postives = 55/87 (63.22%), Query Frame = 2 Query: 2 KQLPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGA-KKEELQQTIAKHL 259 ++L VDF A WCGPCR I P L E+A N+ ++V+ DE ++AT + + ++PT M K+G+ VD V+GA K L TI K+L Sbjct: 17 EKLVLVDFWAPWCGPCRMIGPILEEIAKEF-NLKVVQVNTDENPNLATFYGIRSIPTLMLFKKGQRVDTVIGAVPKSILIHTINKYL 102
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRXF_MESCR (Thioredoxin F-type, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.958e-12 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVD-ELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTI 247 +D WCGPC+ +AP ELA L +V+FLK+D + E K +A + + +PTF LK GKIVD+V GAK ++L I Sbjct: 108 LDMYTQWCGPCKVMAPKYQELAEKLLDVVFLKLDCNQENKPLAKELGIRVVPTFKILKGGKIVDEVTGAKFDKLVAAI 185
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_CHLCV (Thioredoxin OS=Chlamydophila caviae GN=trxA PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.169e-12 Identity = 34/84 (40.48%), Postives = 52/84 (61.90%), Query Frame = 2 Query: 8 LPFVDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAK-KEELQQTIAKH 256 L +DF A WCGPC+ + P L L + +VL KV++D+ + A + V ++PT + K+GK VD+VVG K K+ L + I +H Sbjct: 18 LVLIDFFAEWCGPCKMLTPVLESLEAEVSSVLIGKVNIDDHPAPAEQYGVSSIPTLILFKDGKEVDRVVGLKDKDSLIRLINQH 101
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: THIO_ECHGR (Thioredoxin OS=Echinococcus granulosus GN=TRX PE=3 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.751e-12 Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 2 Query: 20 DFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTI 247 DF A+WCGPC+ +AP L +A V+F+K+DVDE + VA + V AMPT + K G + VVGA + +++ I Sbjct: 28 DFFATWCGPCKSLAPKLDAMAKENEKVIFVKLDVDECQDVAEKYRVTAMPTLIVFKNGCEIGHVVGANEAGIRELI 103
BLAST of FC925354 vs. ExPASy Swiss-Prot
Match: TRX2_SCHPO (Thioredoxin-2, mitochondrial OS=Schizosaccharomyces pombe GN=trx2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.152e-11 Identity = 29/80 (36.25%), Postives = 49/80 (61.25%), Query Frame = 2 Query: 17 VDFTASWCGPCRFIAPFLAELANILPNVLFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKEELQQTIAKH 256 VDF A WCGPC+++ PFL +L+ F+ V+ D+ +A V A+PT + ++G+ +D++VGA + L +AK+ Sbjct: 40 VDFYADWCGPCKYLKPFLEKLSEQNQKASFIAVNADKFSDIAQKNGVYALPTMVLFRKGQELDRIVGADVKTLSSLLAKY 119 The following BLAST results are available for this feature:
BLAST of FC925354 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 96
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925354 ID=FC925354; Name=FC925354; organism=Citrus clementina; type=EST; length=308bpback to top |