FC925355
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925355 vs. ExPASy Swiss-Prot
Match: ANK1_MOUSE (Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.851e-11 Identity = 55/184 (29.89%), Postives = 92/184 (50.00%), Query Frame = 1 Query: 1 RQLPLLGQMQKNQDRRSRSAKPATIHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 552 R +L Q N D S++ +H A +L Q LL S+ P TPLH+++ +V+ LL+ ++E + TPLH AA+NG +++LL HGA I+AK NG++P+H++ + + V+ LL+YNA+ + TPL H++ G ++ ++LL Sbjct: 183 RTAAVLLQNDPNPDVLSKTGF-TPLHIAAHYENLNVAQLLLNRGASV--NFTPQNGITPLHIASRRGNVIMVRLLLD----RGAQIETRTKDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIHMAA----QGDHLDCVRLLLQYNAEIDDITLDHLTPL-HVAAHCGHHRVAKVLL 354 HSP 2 Score: 67.781 bits (164), Expect = 7.642e-11 Identity = 55/164 (33.54%), Postives = 79/164 (48.17%), Query Frame = 1 Query: 73 IHGCAQSGDLLAFQRLLRE--NPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLLWH 558 +H + G L + LL+ +P++ N V +TPLH++A E+ K LL+ +K + A+ +TPLH AA+ G KLLL +GA G TPLH + R T LLE A + +G TPL H++ G +L ELLL H Sbjct: 404 LHVASFMGHLPIVKNLLQRGASPNVSN----VKVETPLHMAARAGHTEVAKYLLQ----NKAKANAKAKDDQTPLHCAARIGHTGMVKLLLENGASPNLATTAGHTPLHTAA----REGHVDTALALLEKEASQACMTKKGFTPL-HVAAKYGKVRLAELLLEH 554 HSP 3 Score: 67.3958 bits (163), Expect = 9.981e-11 Identity = 44/127 (34.65%), Postives = 64/127 (50.39%), Query Frame = 1 Query: 172 TPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLRELLL 552 TPLHV+A Y K + + LLE + A G TPLH+A + + KLLL G + A NG TPLH++ + ++LL+Y +A+ +G TPL HL+ G ++ LLL Sbjct: 534 TPLHVAAKYGKVRLAELLLEHDAHPN----AAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAA----KQNQIEVARSLLQYGGSANAESVQGVTPL-HLAAQEGHTEMVALLL 651
BLAST of FC925355 vs. ExPASy Swiss-Prot
Match: V162_FOWPV (Putative ankyrin repeat protein FPV162 OS=Fowlpox virus GN=FPV162 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11 Identity = 47/138 (34.06%), Postives = 77/138 (55.80%), Query Frame = 1 Query: 172 TPLHVSA-GYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKL--LLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAKDNEGKTPLDHLSNGPGSAKLR---ELLLWHSEE 567 TPLH +A Y + ++ L+E+ E+ A N G+TPLH AA++ N KL L+AHG+ + A +TPLHL+ + +E +K L+E+ A+ ++ D G+TP+ ++S S L+ ELL+ H + Sbjct: 230 TPLHDAATSYELSNTIEMLIEYGA----EVNAANSVGDTPLHCAARSR-NPVHKLKTLIAHGSNVNAVNGISVTPLHLATYSDNATE---ALKVLIEHGAEVNSVDIYGRTPMHYISRSYSSQSLKTAVELLVEHGAD 359
BLAST of FC925355 vs. ExPASy Swiss-Prot
Match: TRPA1_RAT (Transient receptor potential cation channel subfamily A member 1 OS=Rattus norvegicus GN=Trpa1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.642e-11 Identity = 51/166 (30.72%), Postives = 87/166 (52.41%), Query Frame = 1 Query: 73 IHGCAQSGDLLAFQRLLRENPSLLNERNPVMAQTPLHVSAGYNKAEIVKSLLEWPGNDKVELEAQNMYGETPLHMAAKNGCNEAAKLLLAHGAFIEAKANNGMTPLHLSVWYSIRSEDYATVKTLLEYNADCSAK-DNEGKTPLDHLSNGPGSAKLRELLLWHSEE 567 +H + G ++ LLR N S+ ++ ++PLH +A Y + + LL+ + ++ L +++G TPLH+AAKNG ++ +LLL GA +NG T LH ++ T+K +L+ N C+ + D EG T L H + G AK +LL ++ + Sbjct: 418 LHYACRQGAPVSVNNLLRFNVSVHSKSKD--KKSPLHFAASYGRINTCQRLLQDISDTRL-LNEGDLHGMTPLHLAAKNGHDKVVQLLLKKGALF-LSDHNGWTALH----HASMGGYTQTMKVILDTNLKCTDRLDEEGNTAL-HFAAREGHAKAVAMLLSYNAD 574 The following BLAST results are available for this feature:
BLAST of FC925355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925355 ID=FC925355; Name=FC925355; organism=Citrus clementina; type=EST; length=776bpback to top |