FC925362
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: AB17B_ARATH (ABC transporter B family member 17 OS=Arabidopsis thaliana GN=ABCB17 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.067e-11 Identity = 34/68 (50.00%), Postives = 51/68 (75.00%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSK-GGVYTALVKRQLQE 202 E +V +++D+ GRT +VIAHRLST+++AD + V+ +G+IVE+G+HEELL + G YT+LV Q E Sbjct: 533 ERVVQESLDNASIGRTTIVIAHRLSTIRNADVICVIHNGQIVETGSHEELLKRIDGQYTSLVSLQQME 600
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: PMD1_SCHPO (Leptomycin B resistance protein pmd1 OS=Schizosaccharomyces pombe GN=pmd1 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11 Identity = 33/64 (51.56%), Postives = 45/64 (70.31%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQ 193 E LV A+D+ + RT +VIAHRLST+++AD + VV+ G+IVE G+H ELL G Y LV+ Q Sbjct: 603 EVLVQKALDNASRSRTTIVIAHRLSTIRNADNIVVVNAGKIVEQGSHNELLDLNGAYARLVEAQ 666
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MSBA_THICR (Lipid A export ATP-binding/permease protein msbA OS=Thiomicrospira crunogena (strain XCL-2) GN=msbA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11 Identity = 30/63 (47.62%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKR 190 E L+ +AM+SL K RTV++IAHRLST+++AD + V+ +G + E GTH EL++ +Y+ L K+ Sbjct: 512 EKLIQEAMNSLRKNRTVIIIAHRLSTIENADKIVVLEEGSLKEQGTHAELMALNSIYSQLYKQ 574
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MDR2_CRIGR (Multidrug resistance protein 2 OS=Cricetulus griseus GN=PGY2 PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11 Identity = 29/62 (46.77%), Postives = 49/62 (79.03%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVK 187 E +V +A+D +GRT +VIAHRLST+Q+AD + V+ +G++ E GTH++LL++ G+Y ++V+ Sbjct: 1209 EKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLAQKGIYFSMVQ 1270 HSP 2 Score: 67.781 bits (164), Expect = 7.856e-11 Identity = 34/72 (47.22%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQEPKTEI 217 E +V A+D +GRT +VIAHRLSTV++AD +A G IVE G HEEL+ + G+Y LV Q + + E+ Sbjct: 565 EAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVEQGNHEELMKEKGIYCRLVMMQTRGNEVEL 636
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MDR1_RAT (Multidrug resistance protein 1 OS=Rattus norvegicus GN=Abcb1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11 Identity = 29/62 (46.77%), Postives = 49/62 (79.03%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVK 187 E +V +A+D +GRT +VIAHRLST+Q+AD + V+ +G++ E GTH++LL++ G+Y ++V+ Sbjct: 1210 EKVVQEALDKAREGRTCVVIAHRLSTIQNADLIVVIQNGQVKEHGTHQQLLAQKGIYFSMVQ 1271
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MDR1_MOUSE (Multidrug resistance protein 1 OS=Mus musculus GN=Abcb1 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11 Identity = 29/62 (46.77%), Postives = 49/62 (79.03%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVK 187 E +V +A+D +GRT +VIAHRLST+Q+AD + V+ +G++ E GTH++LL++ G+Y ++V+ Sbjct: 1209 EKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIENGKVKEHGTHQQLLAQKGIYFSMVQ 1270
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MDR1_HUMAN (Multidrug resistance protein 1 OS=Homo sapiens GN=ABCB1 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11 Identity = 35/72 (48.61%), Postives = 47/72 (65.28%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQEPKTEI 217 E +V A+D KGRT +VIAHRLSTV++AD +A DG IVE G H+EL+ + G+Y LV Q + E+ Sbjct: 566 EAVVQVALDKARKGRTTIVIAHRLSTVRNADVIAGFDDGVIVEKGNHDELMKEKGIYFKLVTMQTAGNEVEL 637 HSP 2 Score: 67.781 bits (164), Expect = 7.856e-11 Identity = 30/64 (46.88%), Postives = 47/64 (73.44%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQ 193 E +V +A+D +GRT +VIAHRLST+Q+AD + V +G + E GTH++LL++ G+Y ++V Q Sbjct: 1211 EKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGRVKEHGTHQQLLAQKGIYFSMVSVQ 1274
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: AB21B_ARATH (ABC transporter B family member 21 OS=Arabidopsis thaliana GN=ABCB21 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11 Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLS-KGGVYTALVKRQL 196 E +V DA+D +M RT +V+AHRLST+++AD +AVV +G IVE G HE L++ K GVY +LV+ L Sbjct: 1223 ERVVQDALDRVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGKHETLINIKDGVYASLVQLHL 1288 HSP 2 Score: 68.1662 bits (165), Expect = 6.015e-11 Identity = 34/72 (47.22%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELL-SKGGVYTALVKRQLQEPKTE 214 E +V +A+D +M RT +V+AHRLSTV++AD +AV+ G+IVE G+H ELL G Y+ L++ Q +TE Sbjct: 577 ERIVQEALDRIMVNRTTVVVAHRLSTVRNADMIAVIHQGKIVEKGSHSELLRDPEGAYSQLIRLQEDTKQTE 648
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: AB20B_ARATH (ABC transporter B family member 20 OS=Arabidopsis thaliana GN=ABCB20 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.700e-11 Identity = 30/62 (48.39%), Postives = 49/62 (79.03%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVK 187 E +V +A+D LM GR+ ++IA RLS +++AD +AV+ +G++VE GTH+EL++ GG+Y L+K Sbjct: 587 ERIVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELINLGGLYAELLK 648
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: TAGA_DICDI (Serine protease/ABC transporter B family protein tagA OS=Dictyostelium discoideum GN=tagA PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.526e-11 Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQEPKTEI 217 E LV D++D L+ GRTV+++AHRL+T+ +AD +AVVSD I E GT EELL+K G++ V+ Q + E+ Sbjct: 1548 EKLVQDSIDKLVVGRTVIIVAHRLTTILTADIIAVVSDSTISEMGTPEELLAKKGMFYDFVQIQYGKQGEEL 1619 The following BLAST results are available for this feature:
BLAST of FC925362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925362 ID=FC925362; Name=FC925362; organism=Citrus clementina; type=EST; length=789bpback to top |