FC925362
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MSBA_XANAC (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas axonopodis pv. citri GN=msbA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.442e-12 Identity = 37/67 (55.22%), Postives = 47/67 (70.15%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQE 202 E LV DA+ LM RT LVIAHRLST++ AD V V+ G IVE GTH +LL++GG+Y+ L Q +E Sbjct: 520 ERLVQDALHKLMPDRTTLVIAHRLSTIEHADQVLVMDQGRIVERGTHHQLLAQGGLYSHLHGMQFRE 586
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MSBA_SYNAS (Lipid A export ATP-binding/permease protein msbA OS=Syntrophus aciditrophicus (strain SB) GN=msbA PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.442e-12 Identity = 37/69 (53.62%), Postives = 49/69 (71.01%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQEPK 208 E V +A++ LMKGRT LVIAHRLST+++AD + V+ GEIVE G HE LL++ G Y L + Q +E K Sbjct: 523 EMEVQEALERLMKGRTTLVIAHRLSTIRNADRIVVLVKGEIVEEGAHETLLARRGEYYKLHQLQFKEDK 591
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MSBA_XYLFT (Lipid A export ATP-binding/permease protein msbA OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=msbA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQEPKT 211 E LV DA+ LM RT LVIAHRLST++ AD V V+ G I+ESGTH +LL++ G+Y L Q +E T Sbjct: 520 ERLVQDALQRLMPERTTLVIAHRLSTIKHADQVLVMDQGRIIESGTHVDLLARDGLYAYLYSMQFRERPT 589
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MSBA_XYLFA (Lipid A export ATP-binding/permease protein msbA OS=Xylella fastidiosa GN=msbA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQEPKT 211 E LV DA+ LM RT LVIAHRLST++ AD V V+ G I+ESGTH +LL++ G+Y L Q +E T Sbjct: 520 ERLVQDALQRLMPERTTLVIAHRLSTIKHADQVLVMDQGRIIESGTHVDLLARDGLYAYLYSMQFRERPT 589
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MSBA_SALTY (Lipid A export ATP-binding/permease protein msbA OS=Salmonella typhimurium GN=msbA PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12 Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQ 193 E + A+D L K RT LVIAHRLST++ AD + VV DG IVE GTH ELL++ GVY L K Q Sbjct: 516 ERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQ 579
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MSBA_SALTI (Lipid A export ATP-binding/permease protein msbA OS=Salmonella typhi GN=msbA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12 Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQ 193 E + A+D L K RT LVIAHRLST++ AD + VV DG IVE GTH ELL++ GVY L K Q Sbjct: 516 ERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQ 579
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MSBA_SALCH (Lipid A export ATP-binding/permease protein msbA OS=Salmonella choleraesuis GN=msbA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12 Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQ 193 E + A+D L K RT LVIAHRLST++ AD + VV DG IVE GTH ELL++ GVY L K Q Sbjct: 516 ERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQ 579
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MSBA_PSEU2 (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=msbA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12 Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 2 Query: 20 AMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQEP 205 A+D +MKGRT LVIAHRLST++ AD + V+ G+IVE GTH ELL++ G Y L L EP Sbjct: 533 ALDHVMKGRTTLVIAHRLSTIEKADLILVMDAGQIVERGTHTELLAQNGYYARLHAMGLDEP 594
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MSBA_PSE14 (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=msbA PE=3 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12 Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 2 Query: 20 AMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQEP 205 A+D +MKGRT LVIAHRLST++ AD + V+ G+IVE GTH ELL++ G Y L L EP Sbjct: 533 ALDHVMKGRTTLVIAHRLSTIEKADMILVMDAGQIVERGTHTELLAQNGYYARLHAMGLDEP 594
BLAST of FC925362 vs. ExPASy Swiss-Prot
Match: MSBA_FRATT (Lipid A export ATP-binding/permease protein msbA OS=Francisella tularensis subsp. tularensis GN=msbA PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.189e-12 Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 2 Query: 2 EYLVLDAMDSLMKGRTVLVIAHRLSTVQSADTVAVVSDGEIVESGTHEELLSKGGVYTALVKRQLQ 199 E +V A++SL K T +VIAHRLSTV++AD + V+ G +VESG H+ELL +GG+YT L + LQ Sbjct: 544 ERVVQQALESLTKSCTTIVIAHRLSTVENADKIVVMDGGRVVESGKHQELLEQGGLYTRLYQSGLQ 609 The following BLAST results are available for this feature:
BLAST of FC925362 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 140
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925362 ID=FC925362; Name=FC925362; organism=Citrus clementina; type=EST; length=789bpback to top |