FC925396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 8.027e-64 Identity = 116/145 (80.00%), Postives = 123/145 (84.83%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAVLG +EGVKGT+ FTQEGDGPTTV+GS+SGLKPG HGFHVHALGDTTNGCMSTGPHFNPAG EHGAPED+ RHA T +VD+QIPLSG NSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC Sbjct: 1 MVKAVAVLGSSEGVKGTIYFTQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGNEHGAPEDETRHAGDLGNVTVGEDGTVNVNIVDSQIPLSGSNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC4_MAIZE (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays GN=SODCC.3 PE=2 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 1.048e-63 Identity = 115/145 (79.31%), Postives = 124/145 (85.52%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAVLG +EGVKGT+ FTQEGDGPTTV+GS+SGLKPG HGFHVHALGDTTNGCMSTGPH+NPA KEHGAPED+NRHA A V D+QIPL+GPNSIIGRAVVVHADPDDLGKGGHELSK+TGNAGGRVAC Sbjct: 1 MVKAVAVLGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii GN=SODCC PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.369e-63 Identity = 113/145 (77.93%), Postives = 124/145 (85.52%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVK VAVL +EGV GT+ FTQEGDGPTTV+G++SGLKPGPHGFHVHALGDTTNGC+STGPHFNPAGKEHGAP+D+ RHA TA FT+VD QIPL+GP+SIIGRAVVVHADPDDLGKGGHELSKTTGN GGRVAC Sbjct: 1 MVKGVAVLSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALGDTTNGCLSTGPHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQIPLTGPHSIIGRAVVVHADPDDLGKGGHELSKTTGNTGGRVAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.335e-63 Identity = 112/145 (77.24%), Postives = 124/145 (85.52%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAV VL +EGV GTV FTQEG GPTTV+G++SGL+PG HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPED+ RHA TATFT++D+QIPL+GPNSI+GRAVVVHADPDDLG+GGHELSK TGNAGGRVAC Sbjct: 1 MVKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHADPDDLGRGGHELSKATGNAGGRVAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC5_MAIZE (Superoxide dismutase [Cu-Zn] 4AP OS=Zea mays GN=SODCC.2 PE=2 SV=2) HSP 1 Score: 239.965 bits (611), Expect = 8.874e-63 Identity = 113/145 (77.93%), Postives = 123/145 (84.83%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAVLG ++GVKGT+ FTQEGDGPT V+GS+SGLKPG HGFHVHALGDTTNGCMSTGPH+NPA KEHGAPED+NRHA A V D+QIPL+GPNSIIGRAVVVHADPDDLGKGGHELSK+TGNAGGRVAC Sbjct: 1 MVKAVAVLGSSDGVKGTIFFTQEGDGPTAVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 239.195 bits (609), Expect = 1.514e-62 Identity = 112/145 (77.24%), Postives = 123/145 (84.83%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAVL +EGV GT+ F+QEGDGPTTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAP DDNRHA TA+FT+ D QIPL+G NS+IGRAVVVH DPDDLGKGGHELSK+TGNAGGRVAC Sbjct: 1 MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHGDPDDLGKGGHELSKSTGNAGGRVAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_SPIOL (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea GN=SODCC PE=2 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 2.582e-62 Identity = 112/145 (77.24%), Postives = 123/145 (84.83%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 M KAV VL +EGV GTV F QEGDGPTTV+G++SGLKPG HGFHVHALGDTTNGCMSTGPH+NP GKEHGAPEDD RHA TATFT++D+QIPLSGPNSI+GRAVVVHA+PDDLG+GGHELSKTTGNAGGRVAC Sbjct: 1 MGKAVVVLSSSEGVSGTVYFAQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPNGKEHGAPEDDVRHAGDLGNITVGDDGTATFTIIDSQIPLSGPNSIVGRAVVVHAEPDDLGRGGHELSKTTGNAGGRVAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.372e-62 Identity = 113/145 (77.93%), Postives = 123/145 (84.83%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAVL G+EGV+GTV F QEG+GPTT++GSLSGLKPG HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPED NRHA T FTV D+QIPL+G NS++GRAVVVHAD DDLGKGGHELSKTTGNAGGR+AC Sbjct: 1 MVKAVAVLTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVHADSDDLGKGGHELSKTTGNAGGRLAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CARPA (Superoxide dismutase [Cu-Zn] OS=Carica papaya GN=SODCC PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.372e-62 Identity = 111/145 (76.55%), Postives = 122/145 (84.14%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAVL +EGV GT+ FTQ DGPTTV+G +SGLKPG HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDD RHA +F+++D+QIPL+GPNSI+GRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC Sbjct: 1 MVKAVAVLSSSEGVSGTIFFTQAADGPTTVTGEISGLKPGHHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDIRHAGDLGNVNVGDDGKVSFSIIDSQIPLTGPNSIVGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC1_ORYSJ (Superoxide dismutase [Cu-Zn] 1 OS=Oryza sativa subsp. japonica GN=SODCC1 PE=1 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.372e-62 Identity = 113/145 (77.93%), Postives = 122/145 (84.14%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAV VLG +E VKGT+ F QEGDGPTTV+GS+SGLKPG HGFH+HALGDTTNGCMSTGPH+NPAGKEHGAPED+ RHA A VVD+QIPL+GPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC Sbjct: 1 MVKAVVVLGSSEIVKGTIHFVQEGDGPTTVTGSVSGLKPGLHGFHIHALGDTTNGCMSTGPHYNPAGKEHGAPEDETRHAGDLGNVTAGEDGVANIHVVDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 145 The following BLAST results are available for this feature:
BLAST of FC925396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925396 ID=FC925396; Name=FC925396; organism=Citrus clementina; type=EST; length=678bpback to top |