FC925396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_COLGL (Superoxide dismutase [Cu-Zn] OS=Colletotrichum gloeosporioides GN=SOD1 PE=3 SV=3) HSP 1 Score: 138.658 bits (348), Expect = 2.784e-32 Identity = 71/147 (48.30%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAV V+ G V G++ F QE + PT ++ +SG G H+H GD TNGC S GPHFNP K HGAPED NRH + TV D+ + L GP S+IGR +VVH DDLGKG +E S TGNAG R AC Sbjct: 1 MVKAVCVVRGDSKVTGSIVFEQESESAPTKITWDISGNDANAKRGMHIHTFGDNTNGCTSAGPHFNPHNKTHGAPEDSNRHVGDLGNIETDANGNSKGTVTDSHVKLIGPESVIGRTIVVHGGTDDLGKGDNEESLKTGNAGPRPAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CAEEL (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-1 PE=1 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 3.637e-32 Identity = 72/147 (48.98%), Postives = 89/147 (60.54%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQEGDGPTTV-SGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVAC 503 +AVAVL G E V GT+ TQ+ + V G + GL PG HGFHVH GD+TNGC+S GPHFNP GK HG P+ + RH A + D + L GPN+++GR++VVHA DDLG+G E SK TGNAG R AC Sbjct: 26 RAVAVLRG-ETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNVEAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKAEESKKTGNAGARAAC 171
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC4_DICDI (Superoxide dismutase [Cu-Zn] 4 OS=Dictyostelium discoideum GN=sodD PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.203e-32 Identity = 76/147 (51.70%), Postives = 91/147 (61.90%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRH-AXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKA+ V+ G V GT+ F+QE +G P V+G++SGL G HGFH+H GDT+NGC+S G HFNP EHG P RH A + DN I L G SIIGR +VVH + DDLG GG+ LSKTTGNAG RVAC Sbjct: 1 MVKAICVVKGAV-VNGTIIFSQENEGSPVYVNGTISGLSGGLHGFHIHEFGDTSNGCLSAGAHFNPFHVEHGGPNSAIRHVGDLGNITSCPSSKVANVLIQDNVISLFGDLSIIGRTLVVHENQDDLGLGGN-LSKTTGNAGARVAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODE_HAECO (Extracellular superoxide dismutase [Cu-Zn] OS=Haemonchus contortus GN=SOD PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.101e-32 Identity = 69/141 (48.94%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 84 AVLGGTEG-VKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 AV GG G + Q G ++GS+SGL+PG HGFH+H GD NGC++ G HFNP HGAPED NRH + D+ I L+G +++IGRA+V+HAD DDLG+G ELSKTTGNAG RVAC Sbjct: 38 AVKGGNPAKTVGIIDLVQTGT-LVKMNGSVSGLQPGLHGFHIHEKGDLGNGCLAAGAHFNPHKMMHGAPEDSNRHVGDLGNIETPKTGDTPILISDSVISLTGQHNVIGRAIVIHADMDDLGRGTSELSKTTGNAGARVAC 177
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_KLULA (Superoxide dismutase [Cu-Zn] OS=Kluyveromyces lactis GN=SOD1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.101e-32 Identity = 74/147 (50.34%), Postives = 83/147 (56.46%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEG-DGPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MV AVAVL G V G V F QE D T +S ++G GFH+H GD TNGC S GPHFNP K HGAPED+ RH + ++ D I L GP SI+GR VVVHA DDLGKGG S TGNAG R AC Sbjct: 1 MVNAVAVLKGDSSVSGIVRFEQESEDQQTKISWEITGNDANALRGFHIHTFGDNTNGCTSAGPHFNPFNKNHGAPEDEERHVGDLGNIPTDAQGISKGSLTDKHIKLLGPLSIVGRTVVVHAGQDDLGKGGDAESLKTGNAGARHAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODE_ONCVO (Extracellular superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-4 PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.382e-31 Identity = 77/160 (48.12%), Postives = 91/160 (56.88%), Query Frame = 3 Query: 54 RSHSTMV------KAVAVLGGTEGVKGTVSFTQEGDGP-TTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGG---HELSKTTGNAGGRVAC 503 RSHS + +AVAVL G GV G + F Q G TT+SGS+SGL PG HGFHVH GD TNGC S G H+NP GK HG P D +H A + I L GP S+IG ++VVHA+ DDLG+G E S TGNAG R+AC Sbjct: 33 RSHSNGMHGNGARRAVAVLRGDAGVSGIIYFQQGSGGSITTISGSVSGLTPGLHGFHVHQYGDQTNGCTSAGDHYNPFGKTHGGPNDRIKHIGDLGNIVAGANGVAEVYINSYDIKLRGPLSVIGHSLVVHANTDDLGQGTGNMREESLKTGNAGSRLAC 192
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CAEBR (Superoxide dismutase [Cu-Zn] OS=Caenorhabditis briggsae GN=sod-1 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.382e-31 Identity = 71/147 (48.30%), Postives = 86/147 (58.50%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVAC 503 +AVAVL G + V GT+ TQ + P + G + GL PG HGFHVH GD+TNGC+S GPHFNP GK HG P + RH A + D I L G N++IGR++VVHA DDLG+G E S TGNAG R AC Sbjct: 26 RAVAVLRG-DVVSGTIWITQNSESDPAVIEGEIKGLTPGLHGFHVHQYGDSTNGCLSAGPHFNPFGKTHGGPNSETRHVGDLGNVEAGADGVAKVHITDKLITLYGANTVIGRSMVVHAGQDDLGQGVGDKAEESAKTGNAGARAAC 171
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_PAESI (Superoxide dismutase [Cu-Zn] OS=Paecilomyces sinensis GN=SOD1 PE=3 SV=3) HSP 1 Score: 135.961 bits (341), Expect = 1.805e-31 Identity = 72/147 (48.98%), Postives = 86/147 (58.50%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKP-GPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAV VL G + G V+F QE D PTT+S +S GFH+ GD TNGC S GPHFNP GK HG D+NRH + ++ D I L GP+S+IGR VV+HA DDLGKGG++ S TGNAG R AC Sbjct: 1 MVKAVCVLRGDSKITGIVNFEQESDSSPTTISWEISNHDADAKRGFHITPFGDNTNGCTSAGPHFNPHGKTHGNVTDENRHVGDMGNIETDCDGNSKGSIKDKLIKLIGPHSVIGRTVVIHAGTDDLGKGGNDESLKTGNAGPRPAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_NPVAC (Putative superoxide dismutase [Cu-Zn] OS=Autographa californica nuclear polyhedrosis virus GN=SOD PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.528e-30 Identity = 68/146 (46.58%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KA+ ++ G V G + F QE + P +SG L L G HGFHVH GDT+NGC S G HFNP ++HGAP+ + RH + T ++DN + L GP++IIGR++VVH D DDLG H LSKTTGN+GGR+ C Sbjct: 1 MKAICIISGD--VHGKIYFQQESANQPLKISGYLLNLPRGLHGFHVHEYGDTSNGCTSAGEHFNPTNEDHGAPDAEIRHVGDLGNIKSAGYNSLTEVNMMDNVMSLYGPHNIIGRSLVVHTDKDDLGLTDHPLSKTTGNSGGRLGC 144
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODE_CAEEL (Extracellular superoxide dismutase [Cu-Zn] OS=Caenorhabditis elegans GN=sod-4 PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.995e-30 Identity = 71/152 (46.71%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 48 VLRSHSTMVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 V+R+ + + KA A TE + GT+ F Q G ++GS+SGL G HGFH+H GDT NGC+S G H+NP HGAP+D NRH +V D+ LSG SIIGR+VV+H DDLG+G + SKTTGNAG R+AC Sbjct: 21 VIRARAYIFKAEAGKIPTELI-GTIDFDQSGSF-LKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLAC 170 The following BLAST results are available for this feature:
BLAST of FC925396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925396 ID=FC925396; Name=FC925396; organism=Citrus clementina; type=EST; length=678bpback to top |