FC925396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC6_DICDI (Probable superoxide dismutase [Cu-Zn] 6 OS=Dictyostelium discoideum GN=sodF PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.404e-30 Identity = 64/146 (43.84%), Postives = 91/146 (62.33%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MV A+ ++ G GV+G V+ +QE +G P ++G++SGL PG HG HVH GDT+NGC+S G H+NP +EHG+P D RH AT ++ D + L G S++GR +V+H+D DD G+G SKT G++G RV C Sbjct: 1 MVNAIVIIKGL-GVEGKVTLSQECEGSPIYINGTVSGLTPGQHGMHVHEFGDTSNGCISAGDHYNPLHREHGSPLDVERHIGDLGNIKALSNGVATISIRDTIMSLFGDISVMGRTMVIHSDRDDYGRGNFPDSKTAGHSGKRVGC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_NPVOP (Putative superoxide dismutase [Cu-Zn] OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=SOD PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.689e-29 Identity = 68/146 (46.58%), Postives = 85/146 (58.22%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KA+ ++ G G + F Q D P +++G L L G HGFHVH GDT+NGC S G HFNP + HGAP+ RH T + DN I L GP SI+GR++VVH D DDLG G H LSKTTGN+GGR+ C Sbjct: 1 MKAICIVAGE--ASGRIYFKQGAPDEPVSITGYLLNLPRGLHGFHVHEFGDTSNGCTSAGEHFNPTRQRHGAPDAAERHVGDLGNVRSAGCTALTAIHMSDNVITLFGPLSILGRSLVVHTDRDDLGLGEHPLSKTTGNSGGRLGC 144
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: CCS_HUMAN (Copper chaperone for superoxide dismutase OS=Homo sapiens GN=CCS PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.419e-29 Identity = 63/142 (44.37%), Postives = 82/142 (57.75%), Query Frame = 3 Query: 78 AVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 AVA+LGG V+G V F Q + G++ GL+PG HG HVH GD TN C S G HFNP G HG P+D +RH A F + D Q+ + +IGR++++ DDLG+GGH LSK TGN+G R+AC Sbjct: 89 AVAILGGPGTVQGVVRFLQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGRGGHPLSKITGNSGERLAC 227
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: CCS_RAT (Copper chaperone for superoxide dismutase OS=Rattus norvegicus GN=Ccs PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 8.384e-29 Identity = 63/142 (44.37%), Postives = 82/142 (57.75%), Query Frame = 3 Query: 78 AVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 AVA++ G+ V+G V F Q + G++ GL+PG HG HVH GD T C S G HFNP G HG P+D +RH ATF + D Q+ + +IGR++VV DDLG+GGH LSK TGN+G R+AC Sbjct: 89 AVAIMEGSGTVQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTKDCSSCGDHFNPDGASHGGPQDTDRHRGDLGNVHAEASGRATFRIEDKQLKVW---DVIGRSLVVDEGEDDLGRGGHPLSKVTGNSGKRLAC 227
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: CCS_PIG (Copper chaperone for superoxide dismutase OS=Sus scrofa GN=CCS PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.430e-28 Identity = 63/142 (44.37%), Postives = 81/142 (57.04%), Query Frame = 3 Query: 78 AVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 AVA+LGG+ V+G V F Q + G++ GLKPG HG HVH GD T C S G HFNP G HG P+D +RH A F + D + + +IGR++V+ DDLG+GGH LSK TGN+G R+AC Sbjct: 89 AVAILGGSGPVQGVVRFLQLTPERCLIEGTIDGLKPGLHGLHVHQFGDLTRNCNSCGDHFNPDGMSHGGPQDSDRHRGDLGNVCADADGRAVFRMEDELLKVW---DVIGRSLVIDEGEDDLGRGGHPLSKITGNSGERLAC 227
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: CCS_MOUSE (Copper chaperone for superoxide dismutase OS=Mus musculus GN=Ccs PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.430e-28 Identity = 62/142 (43.66%), Postives = 81/142 (57.04%), Query Frame = 3 Query: 78 AVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 AVA+L G ++G V F Q + G++ GL+PG HG HVH GD T C S G HFNP G HG P+D +RH ATF + D Q+ + +IGR++V+ DDLG+GGH LSK TGN+G R+AC Sbjct: 89 AVAILEGCGSIQGVVRFLQLSSELCLIEGTIDGLEPGLHGLHVHQYGDLTRDCNSCGDHFNPDGASHGGPQDTDRHRGDLGNVRAEAGGRATFRIEDKQLKVW---DVIGRSLVIDEGEDDLGRGGHPLSKITGNSGKRLAC 227
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_PBCV1 (Superoxide dismutase [Cu-Zn] OS=Paramecium bursaria Chlorella virus 1 GN=A245R PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.868e-28 Identity = 70/145 (48.28%), Postives = 83/145 (57.24%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPG-PHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 V A+AVL G VKGTV F +E +S +SGLKP HGFHVH GD T+GC S HFNP G HG P+ RH A ++ D+ I L G +IIGRA+VVHAD DDLG GG+ S TGNAG R+ C Sbjct: 35 VSAIAVLEGP--VKGTVRFVEESS-KVKISVDISGLKPNRKHGFHVHEAGDLTDGCTSACAHFNPFGTAHGGPDSKIRHVGDLGNILADKNGKAKYSFYDSMIKLRGKCNIIGRAIVVHADTDDLGLGGNAESLKTGNAGKRIGC 176
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODE_DIRIM (Extracellular superoxide dismutase [Cu-Zn] OS=Dirofilaria immitis PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.161e-28 Identity = 66/147 (44.90%), Postives = 85/147 (57.82%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQEGDGP-TTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVAC 503 KAVAVL ++ V G + F Q TT+ G+++GL PG HGFH+H G NGC S H+NP K HG P ++ +H A ++ N I LSGP S+IGR++VVHA+PDDLGKG E S TGNAG R+ C Sbjct: 41 KAVAVLK-SDTVNGIIYFQQNNRASATTIYGTINGLTPGLHGFHIHQYGIKANGCTSAAAHYNPFEKTHGRPTNNIKHIGDLRNIKAGADGVANVNIISNHIQLSGPLSVIGRSLVVHANPDDLGKGNGDAREESLKTGNAGSRIVC 186
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_LAMCR (Superoxide dismutase [Cu-Zn] (Fragment) OS=Lampanyctus crocodilus GN=sod1 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26 Identity = 68/146 (46.58%), Postives = 80/146 (54.79%), Query Frame = 3 Query: 69 MVKAVAVLGGTEG-VKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVA 500 MVKAV VL GT G V GTV F QE D P ++G + GL PG HGFHVHA GD TN H P D +RH A + D + L+GP SIIGR +V+H DDLGKGG++ S TGNAGGR+A Sbjct: 1 MVKAVCVLKGTTGEVTGTVYFEQESDSAPVKLTGQIIGLAPGLHGFHVHAFGDNTNXXXXXXXXXXXXXXTHAGPTDKDRHVGDLGN-------VAKIDITDKMLTLNGPLSIIGRTMVIHEKADDLGKGGNDESLKTGNAGGRMA 139
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DROOB (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila obscura GN=Sod PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26 Identity = 58/108 (53.70%), Postives = 68/108 (62.96%), Query Frame = 3 Query: 111 KGTVSFTQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHAD 431 KGTV F QE + P V+G + GL G HGFHVH GD TNGCMS+GPHFNP KEHGAP D+NRH ++ D++I L G +SIIGR VVVHAD Sbjct: 6 KGTVFFEQETSEAPVKVTGEVLGLTKGLHGFHVHEFGDNTNGCMSSGPHFNPRSKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHAD 113 The following BLAST results are available for this feature:
BLAST of FC925396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925396 ID=FC925396; Name=FC925396; organism=Citrus clementina; type=EST; length=678bpback to top |