FC925396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_SCHMA (Superoxide dismutase [Cu-Zn] OS=Schistosoma mansoni GN=SOD PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.273e-42 Identity = 84/145 (57.93%), Postives = 95/145 (65.52%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQEGD-GPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KAV V+ GT GVKG V FTQE D GP V SGLK G HGFHVH GDTTNGC S G HFNP +EHGAPED RH A + D I L+G +SIIGR +V+H + DDLG+GGHELSK TGNAGGR+AC Sbjct: 1 MKAVCVMTGTAGVKGVVKFTQETDNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDLGNVVAGADGNAVYNATDKLISLNGSHSIIGRTMVIHENEDDLGRGGHELSKVTGNAGGRLAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DROPS (Superoxide dismutase [Cu-Zn] OS=Drosophila pseudoobscura pseudoobscura GN=Sod PE=3 SV=3) HSP 1 Score: 170.629 bits (431), Expect = 6.612e-42 Identity = 85/146 (58.22%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAV V+ G KGTV F QE + P V+G + GL G HGFHVH GD TNGCMS+GPHFNP KEHGAP D+NRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSKTTGNAG R+ C Sbjct: 1 MVKAVCVINGD--AKGTVFFEQETSEAPVKVTGEVLGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPRNKEHGAPTDENRHLGDLGNIQAAGDSPTAVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKTTGNAGARIGC 144
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DROSI (Superoxide dismutase [Cu-Zn] OS=Drosophila simulans GN=Sod PE=3 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.128e-41 Identity = 85/146 (58.22%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +VKAV V+ G KGTV F QE G P VSG + GL G HGFHVH GD TNGCMS+GPHFNP GKEHGAP D+NRH + D++I L G +SIIGR VVVHAD DDLG+GGHELSK+TGNAG R+ C Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DROSE (Superoxide dismutase [Cu-Zn] OS=Drosophila sechellia GN=Sod PE=3 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.128e-41 Identity = 85/146 (58.22%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +VKAV V+ G KGTV F QE G P VSG + GL G HGFHVH GD TNGCMS+GPHFNP GKEHGAP D+NRH + D++I L G +SIIGR VVVHAD DDLG+GGHELSK+TGNAG R+ C Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DROME (Superoxide dismutase [Cu-Zn] OS=Drosophila melanogaster GN=Sod PE=1 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.128e-41 Identity = 85/146 (58.22%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +VKAV V+ G KGTV F QE G P VSG + GL G HGFHVH GD TNGCMS+GPHFNP GKEHGAP D+NRH + D++I L G +SIIGR VVVHAD DDLG+GGHELSK+TGNAG R+ C Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DROMA (Superoxide dismutase [Cu-Zn] OS=Drosophila mauritiana GN=Sod PE=3 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 1.128e-41 Identity = 85/146 (58.22%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +VKAV V+ G KGTV F QE G P VSG + GL G HGFHVH GD TNGCMS+GPHFNP GKEHGAP D+NRH + D++I L G +SIIGR VVVHAD DDLG+GGHELSK+TGNAG R+ C Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DROYA (Superoxide dismutase [Cu-Zn] OS=Drosophila yakuba GN=Sod PE=3 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.473e-41 Identity = 85/146 (58.22%), Postives = 98/146 (67.12%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +VKAV V+ G KGTV F QE + P VSG + GL G HGFHVH GD TNGCMS+GPHFNP GKEHGAP D+NRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSK+TGNAG R+ C Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSETPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DROOR (Superoxide dismutase [Cu-Zn] OS=Drosophila orena GN=Sod PE=3 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.473e-41 Identity = 85/146 (58.22%), Postives = 98/146 (67.12%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +VKAV V+ G KGTV F QE + P VSG + GL G HGFHVH GD TNGCMS+GPHFNP GKEHGAP D+NRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSK+TGNAG R+ C Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSETPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSRITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_PRIGL (Superoxide dismutase [Cu-Zn] OS=Prionace glauca GN=sod1 PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.924e-41 Identity = 81/144 (56.25%), Postives = 93/144 (64.58%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KAV VL GT V GTV F Q DGP T+ GS++GL PG HGFHVHA GD TNGC+S GPH+NP K HG P+D+ RH A F + D Q+ LSG SIIGR +VVH DDLGKGG E S TGNAG R+AC Sbjct: 1 MKAVCVLKGTGEVTGTVLFEQAADGPVTLKGSITGLTPGKHGFHVHAFGDNTNGCISAGPHYNPFSKNHGGPDDEERHVGDLGNVEANGNGVAEFEIKDRQLHLSGERSIIGRTLVVHEKEDDLGKGGDEESLRTGNAGSRLAC 144
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CHYAM (Superoxide dismutase [Cu-Zn] OS=Chymomyza amoena GN=Sod PE=3 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 3.281e-41 Identity = 83/146 (56.85%), Postives = 95/146 (65.07%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGD-GPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 + KAV V+ G KGTV F QE P V G ++GL G HGFHVH GD TNGCMS+GPHFNP KEHGAP D+NRH + D++I L G NSI+GR VVVHADPDDLGKGGHELSK+TGNAG R+ C Sbjct: 2 VAKAVCVINGD--AKGTVYFEQEDACAPVKVCGEITGLNKGQHGFHVHEFGDNTNGCMSSGPHFNPLNKEHGAPTDENRHLGDLGNIEAPGDGPTKVCINDSKITLFGENSIVGRTVVVHADPDDLGKGGHELSKSTGNAGARIGC 145 The following BLAST results are available for this feature:
BLAST of FC925396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925396 ID=FC925396; Name=FC925396; organism=Citrus clementina; type=EST; length=678bpback to top |