FC925396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DROTE (Superoxide dismutase [Cu-Zn] OS=Drosophila teissieri GN=Sod PE=3 SV=3) HSP 1 Score: 167.933 bits (424), Expect = 4.286e-41 Identity = 84/146 (57.53%), Postives = 98/146 (67.12%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +VKAV V+ G KGTV F QE + P VSG + GL G HGFHVH GD TNGCMS+GPHFNP GKEHGAP D+NRH ++ D++I L G +SIIGR VVVHAD DDLG+GGHELSK+TGNAG R+ C Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSETPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKSTGNAGARIGC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DROBS (Superoxide dismutase [Cu-Zn] (Fragment) OS=Drosophila busckii GN=Sod PE=3 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.286e-41 Identity = 81/132 (61.36%), Postives = 90/132 (68.18%), Query Frame = 3 Query: 111 KGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KGTV F QE + P V+G ++GL G HGFHVH GD TNGCMS+GPHFNP GKEHGAP D+NRH + D +I L G NSIIGR VVVHADPDDLGKGGHELSKTTGNAG R+ C Sbjct: 6 KGTVFFEQESEKCPVKVTGEVTGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPQGKEHGAPTDENRHLGDLGNITATGDGPTAVDICDCKITLFGANSIIGRTVVVHADPDDLGKGGHELSKTTGNAGARIGC 137
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_HALRO (Superoxide dismutase [Cu-Zn] OS=Halocynthia roretzi PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.629e-40 Identity = 83/144 (57.64%), Postives = 99/144 (68.75%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KAV VL G+ VKGT++F Q+ G TV+G +SGL PG HGFH+H GD TNGC S+G HFNP + HGAPEDD RH AT + D I L+G +SIIGRAVVVHA DDLGKGGHE SKTTG+AGGR++C Sbjct: 3 IKAVCVLVGS--VKGTLNFKQDAIGSCTVTGEVSGLIPGKHGFHIHEYGDLTNGCTSSGGHFNPFKQIHGAPEDDIRHVGDLGNITADSSGVATVNITDRMISLTGEHSIIGRAVVVHAGEDDLGKGGHEDSKTTGHAGGRLSC 144
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DROER (Superoxide dismutase [Cu-Zn] OS=Drosophila erecta GN=Sod PE=3 SV=3) HSP 1 Score: 166.007 bits (419), Expect = 1.629e-40 Identity = 84/146 (57.53%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEG-DGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +VKAV V+ G KGTV F QE + P VSG + GL HGFHVH GD TNGCMS+GPHFNP GKEHGAP D+NRH ++ D++I L G +SIIGR VVVHAD DDLGKGGHELSK+TGNAG R+ C Sbjct: 2 VVKAVCVINGD--AKGTVFFEQESSETPVKVSGEVCGLAKCLHGFHVHEFGDNTNGCMSSGPHFNPHGKEHGAPVDENRHLGDLGNIEATGDCPTKVSITDSKITLFGADSIIGRTVVVHADADDLGKGGHELSKSTGNAGARIGC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CERCA (Superoxide dismutase [Cu-Zn] OS=Ceratitis capitata GN=Sod PE=3 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 8.083e-40 Identity = 82/146 (56.16%), Postives = 92/146 (63.01%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQE-GDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +VKAV V+ G VKGTV F Q+ P V+G ++GL G HGFHVH GD TNGC S GPHFNP G HGAP D NRH + D I L G NSI+GR +VVHADPDDLGKGGHELSKTTGNAG R+ C Sbjct: 2 VVKAVCVINGD--VKGTVHFEQQDAKSPVLVTGEVNGLAKGLHGFHVHEFGDNTNGCTSAGPHFNPYGNSHGAPSDLNRHLGDLGNIEASGDGATKVEISDKLITLFGENSIVGRTIVVHADPDDLGKGGHELSKTTGNAGARLGC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC2_XENLA (Superoxide dismutase [Cu-Zn] B OS=Xenopus laevis GN=sod1-B PE=1 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 6.842e-39 Identity = 79/145 (54.48%), Postives = 91/145 (62.76%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAV VL G+ VKG V F Q+ +G +V G + GL G HGFH+H GD TNGCMS G HFNP K HGAP D +RH A F + D+ I L GPNSIIGR VVH DDLGKGG++ S TGNAGGR+AC Sbjct: 1 MVKAVCVLAGSGDVKGVVHFEQQDEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHV-GDLGNVTAEGGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGKGGNDESLKTGNAGGRLAC 144
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC1_XENLA (Superoxide dismutase [Cu-Zn] A OS=Xenopus laevis GN=sod1-A PE=1 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 1.524e-38 Identity = 79/145 (54.48%), Postives = 89/145 (61.38%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAV VL G+ VKG V F Q+ DG TV G + GL G HGFH+H GD TNGC+S GPHFNP K HG+P+D +RH A F D QI L G SIIGR VVH DDLGKGG + S TGNAGGR+AC Sbjct: 1 MVKAVCVLAGSGDVKGVVRFEQQDDGDVTVEGKIEGLTDGNHGFHIHVFGDNTNGCLSAGPHFNPQNKNHGSPKDADRHV-GDLGNVTAEGGVAQFKFTDPQISLKGERSIIGRTAVVHEKQDDLGKGGDDESLKTGNAGGRLAC 144
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CAVPO (Superoxide dismutase [Cu-Zn] OS=Cavia porcellus GN=SOD1 PE=1 SV=3) HSP 1 Score: 158.303 bits (399), Expect = 3.396e-38 Identity = 75/143 (52.45%), Postives = 90/143 (62.94%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KAV VL G V+G + F Q+ +GP V G ++GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH A ++ D+ I LSG NSIIGR +VVH PDDLGKGG+E S TGNAG R+AC Sbjct: 4 KAVCVLKGDGPVQGIIHFEQKANGPVVVKGRITGLVEGKHGFHVHEFGDNTQGCTSAGPHFNPLSKKHGGPQDEERHVGDLGNVTAGADGVANVSIEDSLISLSGANSIIGRTMVVHEKPDDLGKGGNEESTKTGNAGSRLAC 146
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_DANRE (Superoxide dismutase [Cu-Zn] OS=Danio rerio GN=sod1 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.435e-38 Identity = 79/144 (54.86%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KAV VL GT V GTV F QEG+ P V+G ++GL PG HGFHVHA GD TNGC+S GPHFNP K HG P D RH A + D + LSG +SIIGR +V+H DDLGKGG+E S TGNAGGR+AC Sbjct: 4 KAVCVLKGTGEVTGTVYFNQEGEKKPVKVTGEITGLTPGKHGFHVHAFGDNTNGCISAGPHFNPHDKTHGGPTDSVRHVGDLGNVTADASGVAKIEIEDAMLTLSGQHSIIGRTMVIHEKEDDLGKGGNEESLKTGNAGGRLAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CALJA (Superoxide dismutase [Cu-Zn] OS=Callithrix jacchus GN=SOD1 PE=2 SV=3) HSP 1 Score: 157.918 bits (398), Expect = 4.435e-38 Identity = 78/145 (53.79%), Postives = 95/145 (65.52%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG PED+ RH A ++ D+ I LSG +SIIGR +VVH DDLGKGG+E SK TGNAGGR+AC Sbjct: 3 MKAVCVLKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLAC 147 The following BLAST results are available for this feature:
BLAST of FC925396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925396 ID=FC925396; Name=FC925396; organism=Citrus clementina; type=EST; length=678bpback to top |