FC925396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_ASPJA (Superoxide dismutase [Cu-Zn] (Fragment) OS=Aspergillus japonicus GN=sodC PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.435e-38 Identity = 73/98 (74.49%), Postives = 79/98 (80.61%), Query Frame = 3 Query: 192 HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNA 485 HGFHVHALGDTTNGCMSTGPHFNP GKEHGAP+D+NRHA A V D+QIPL+G +SIIGRAVVVHADPDDLGKGGHELSKTTGN+ Sbjct: 8 HGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNS 105
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_BOMMO (Superoxide dismutase [Cu-Zn] OS=Bombyx mori PE=1 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 7.565e-38 Identity = 82/145 (56.55%), Postives = 92/145 (63.45%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQEGD-GPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTAT-FTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KAV VL G V GTV F Q+ + P VSG + GL G HGFHVH GD TNGC S G HFNP ++HG P RH T ++ D+QI L GPNSIIGR +VVHADPDDLG GGHELSKTTGNAGGR+AC Sbjct: 4 KAVCVLRGD--VSGTVFFDQQDEKSPVVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGHELSKTTGNAGGRIAC 146
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_MACMU (Superoxide dismutase [Cu-Zn] OS=Macaca mulatta GN=SOD1 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37 Identity = 77/145 (53.10%), Postives = 94/145 (64.83%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG P+D+ RH A + D+ I LSG +SIIGR +VVH DDLGKGG+E SK TGNAGGR+AC Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_MACFU (Superoxide dismutase [Cu-Zn] OS=Macaca fuscata fuscata GN=SOD1 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37 Identity = 77/145 (53.10%), Postives = 94/145 (64.83%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG P+D+ RH A + D+ I LSG +SIIGR +VVH DDLGKGG+E SK TGNAGGR+AC Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_MACFA (Superoxide dismutase [Cu-Zn] OS=Macaca fascicularis GN=SOD1 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.685e-37 Identity = 77/145 (53.10%), Postives = 94/145 (64.83%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG P+D+ RH A + D+ I LSG +SIIGR +VVH DDLGKGG+E SK TGNAGGR+AC Sbjct: 3 MKAVCVLKGDSPVQGTINFEQKESNGPVKVWGSITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRQHGGPKDEERHVGDLGNVTAGKDGVAKVSFEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESKKTGNAGGRLAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CARCR (Superoxide dismutase [Cu-Zn] OS=Caretta caretta PE=1 SV=2) HSP 1 Score: 153.68 bits (387), Expect = 8.364e-37 Identity = 78/156 (50.00%), Postives = 93/156 (59.62%), Query Frame = 3 Query: 72 VKAVAVLGGT------------EGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 VKAV VL G E VKG + F Q+G+GP T+SGS++GL G HGFHVH GD TNGC S G HFNP GK HG P+D+ RH A + D+ I L+G SIIGR +VVH DDLGKGG++ S TGNAG R+AC Sbjct: 4 VKAVCVLKGEDPVKEPVKGPVKEPVKGIIYFEQQGNGPVTLSGSITGLTEGKHGFHVHEFGDNTNGCTSAGAHFNPPGKNHGGPQDNERHVGDLGNVIANKEGVAEVCIKDSLISLTGSQSIIGRTMVVHEKEDDLGKGGNDESLKTGNAGSRLAC 159
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CEBAP (Superoxide dismutase [Cu-Zn] OS=Cebus apella GN=SOD1 PE=2 SV=3) HSP 1 Score: 153.295 bits (386), Expect = 1.092e-36 Identity = 76/145 (52.41%), Postives = 93/145 (64.14%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KAV VL G V+GT++F Q E +GP V GS++GL G HGFHVH GD T GC S GPHFNP ++HG PED+ RH A ++ D+ I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+AC Sbjct: 3 MKAVCVLKGDGPVQGTINFEQKESNGPVKVWGSITGLAEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPEDEERHVGDLGNVTAGKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_BRUPA (Superoxide dismutase [Cu-Zn] OS=Brugia pahangi GN=SODC PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.092e-36 Identity = 79/145 (54.48%), Postives = 92/145 (63.45%), Query Frame = 3 Query: 81 VAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVAC 503 +AVL G + V G + F QE +G PTT+SG + GL PG HGFHVH GDTTNGC+S GPHFNP K HG P D+ RH TA + D + L GPNSIIGR++VVHAD DDLGKG + S TGNAG RVAC Sbjct: 6 IAVLRG-DNVSGIIRFKQEKEGSPTTISGEIKGLTPGLHGFHVHQYGDTTNGCISAGPHFNPYNKTHGGPTDEMRHVGDLGNIVAGADGTAHIDISDKHVQLLGPNSIIGRSLVVHADQDDLGKGVGDKKDESLKTGNAGARVAC 149
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_SHEEP (Superoxide dismutase [Cu-Zn] OS=Ovis aries GN=SOD1 PE=1 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.427e-36 Identity = 76/143 (53.15%), Postives = 90/143 (62.94%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KAV VL G V+GT+ F +GD V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH A +VD I LSG SIIGR +VVH PDDLG+GG+E S TGNAGGR+AC Sbjct: 4 KAVCVLKGDGPVQGTIRFEAKGD-KVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGGRLAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_BOSMU (Superoxide dismutase [Cu-Zn] OS=Bos mutus grunniens GN=SOD1 PE=2 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 2.434e-36 Identity = 75/143 (52.45%), Postives = 90/143 (62.94%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KAV VL G V+GT+ F +GD V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH A +VD+ I LSG SIIGR +VVH PDDLG+GG+E S TGNAG R+AC Sbjct: 4 KAVCVLKGDGPVQGTIHFEAKGD-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAVVDIVDSLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSRLAC 145 The following BLAST results are available for this feature:
BLAST of FC925396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925396 ID=FC925396; Name=FC925396; organism=Citrus clementina; type=EST; length=678bpback to top |