FC925396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_MOUSE (Superoxide dismutase [Cu-Zn] OS=Mus musculus GN=Sod1 PE=1 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.208e-35 Identity = 74/145 (51.03%), Postives = 89/145 (61.38%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KAV VL G V+GT+ F Q+ G P +SG ++GL G HGFHVH GD T GC S GPHFNP K+HG P D+ RH A ++ D I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+AC Sbjct: 3 MKAVCVLKGDGPVQGTIHFEQKASGEPVVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKKHGGPADEERHVGDLGNVTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CANGA (Superoxide dismutase [Cu-Zn] OS=Candida glabrata GN=SOD1 PE=3 SV=3) HSP 1 Score: 149.443 bits (376), Expect = 1.577e-35 Identity = 75/147 (51.02%), Postives = 93/147 (63.27%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGD-GPTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAVL G+ GV G V+ Q + PTT++ ++G P GFH+H GD TNGC+S GPHFNP K HGAP+D+NRH A + D+ + L GP S++GR+VVVHA DDLGKGG+E S TGNAG R AC Sbjct: 1 MVKAVAVLRGSAGVSGVVTLEQASEQDPTTITYEIAGNDPNAERGFHIHEFGDVTNGCVSAGPHFNPFKKTHGAPQDENRHVGDLGNIKTDAQGVAKGVITDSLVKLIGPTSVVGRSVVVHAGTDDLGKGGNEESLKTGNAGPRPAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_ONCVO (Superoxide dismutase [Cu-Zn] OS=Onchocerca volvulus GN=sod-1 PE=3 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 2.691e-35 Identity = 78/146 (53.42%), Postives = 93/146 (63.70%), Query Frame = 3 Query: 78 AVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKG---GHELSKTTGNAGGRVAC 503 A+AVL G + V G + F Q+ +G PTTV+G + GL PG HGFH+H GDTTNGC+S GPHFNP K HG D+ RH TA ++ D I L GPNSIIGR++VVHAD DDLGKG + S TGNAG RVAC Sbjct: 5 AIAVLRG-DTVSGIIRFKQDKEGLPTTVTGEVKGLTPGLHGFHIHQYGDTTNGCISAGPHFNPYNKTHGDRTDEIRHVGDLGNIEAGADGTAHISISDQHIQLLGPNSIIGRSIVVHADQDDLGKGVGAKKDESLKTGNAGARVAC 149
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_HYLLA (Superoxide dismutase [Cu-Zn] OS=Hylobates lar GN=SOD1 PE=2 SV=3) HSP 1 Score: 148.673 bits (374), Expect = 2.691e-35 Identity = 73/145 (50.34%), Postives = 91/145 (62.76%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KAV VL G V+G ++F Q E +GP V G ++GL G HGFHVH GD T GC S GPHFNP ++HG P+D+ RH A ++ D+ I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+AC Sbjct: 3 MKAVCVLKGDSPVQGIINFEQKESNGPVKVYGRITGLTEGLHGFHVHQFGDNTQGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVAKVSIEDSVISLSGDHSIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC5_DICDI (Superoxide dismutase [Cu-Zn] 5 OS=Dictyostelium discoideum GN=sodE PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.514e-35 Identity = 72/145 (49.66%), Postives = 91/145 (62.76%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 + A+ V+ G +GV G ++F Q + P +SG +SGLK G HGFHVH GDTTNGC+S G HFNP KEHG+P D+NRH + + DN I L G NSIIGR++VVH DDLG+G + SK TGNAG R+ C Sbjct: 1 MSAICVIKG-DGVDGIINFKQNDNKSPVIISGVISGLKEGKHGFHVHEFGDTTNGCLSAGAHFNPFKKEHGSPNDENRHVGDLGNIESNKDKKSIINITDNIITLFGQNSIIGRSIVVHDKEDDLGRGNSQDSKITGNAGSRLGC 144
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_RAT (Superoxide dismutase [Cu-Zn] OS=Rattus norvegicus GN=Sod1 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.590e-35 Identity = 73/145 (50.34%), Postives = 88/145 (60.69%), Query Frame = 3 Query: 72 VKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 +KAV VL G V+G + F Q+ G P VSG ++GL G HGFHVH GD T GC + GPHFNP K+HG P D+ RH A ++ D I LSG +SIIGR +VVH DDLGKGG+E S TGNAG R+AC Sbjct: 3 MKAVCVLKGDGPVQGVIHFEQKASGEPVVVSGQITGLTEGEHGFHVHQYGDNTQGCTTAGPHFNPHSKKHGGPADEERHVGDLGNVAAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGKGGNEESTKTGNAGSRLAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_ASPFU (Superoxide dismutase [Cu-Zn] OS=Aspergillus fumigatus GN=sodC PE=2 SV=3) HSP 1 Score: 147.902 bits (372), Expect = 4.590e-35 Identity = 78/147 (53.06%), Postives = 90/147 (61.22%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQ-EGDGPTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAVL G + GTV+F Q + + PTTVS ++ G P GFHVH GD TNGC S GPHFNP GK HGAPED RH A + D I L G S++GR +VVHA DDLG+GG+E SK TGNAG R AC Sbjct: 1 MVKAVAVLRGDSKITGTVTFEQADENSPTTVSWNIKGNDPNAKRGFHVHQFGDNTNGCTSAGPHFNPYGKTHGAPEDSERHVGDLGNFETDAEGNAVGSKQDKLIKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGARPAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CAPHI (Superoxide dismutase [Cu-Zn] OS=Capra hircus GN=SOD1 PE=2 SV=3) HSP 1 Score: 147.517 bits (371), Expect = 5.994e-35 Identity = 74/143 (51.75%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KAV VL G V+GT+ F +GD V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH A +VD I LSG SIIGR +VVH PDDLG+GG+E S TGNAG +AC Sbjct: 4 KAVCVLKGDGPVQGTIHFEAKGD-KVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVKADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGRGGNEESTKTGNAGSCLAC 145
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CORMI (Superoxide dismutase [Cu-Zn] OS=Cordyceps militaris GN=SOD1 PE=2 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 7.829e-35 Identity = 76/147 (51.70%), Postives = 90/147 (61.22%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAV VL G V GTV+F QE + PTT++ ++G P GFH+H GD TNGC S GPHFNP GK HGAP D RH A +V D+ + L GP+S++GR VVVH DDLGKGG+E S TGNAG R AC Sbjct: 1 MVKAVCVLRGDAKVAGTVTFEQESESAPTTITWDITGNDPNAERGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDAARHVGDLGNIKTDGQGNAKGSVQDSHVKLIGPHSVVGRTVVVHGGTDDLGKGGNEESLKTGNAGPRPAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CEREL (Superoxide dismutase [Cu-Zn] OS=Cervus elaphus GN=SOD1 PE=2 SV=3) HSP 1 Score: 147.132 bits (370), Expect = 7.829e-35 Identity = 73/143 (51.05%), Postives = 89/143 (62.24%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KAV VL G V+GT+ F +G V+GS++GL G HGFHVH GD T GC S GPHFNP K+HG P+D+ RH A +VD+ I LSG +SIIGR +VVH PDDLG+GG+E S TGNA R+AC Sbjct: 4 KAVCVLKGDGPVQGTIRFEAKGH-TVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTADKNGVAKVDIVDSLISLSGEHSIIGRTMVVHEKPDDLGRGGNEESTKTGNARNRLAC 145 The following BLAST results are available for this feature:
BLAST of FC925396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925396 ID=FC925396; Name=FC925396; organism=Citrus clementina; type=EST; length=678bpback to top |