FC925396
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_XIPGL (Superoxide dismutase [Cu-Zn] OS=Xiphias gladius GN=sod1 PE=1 SV=2) HSP 1 Score: 146.747 bits (369), Expect = 1.022e-34 Identity = 74/146 (50.68%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDGPTTVSGS-LSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 ++KAV VL G GTV F QEG+ G L GL PG HGFHVH GD TNGC+S GPHFNPA K+H P+D++RH A + D +I L+GP SIIGR +V+H DDLG+GG+E S TGNAG R+AC Sbjct: 2 VLKAVCVLRGAGETTGTVYFEQEGNANAVGKGIILKGLTPGEHGFHVHGFGDNTNGCISAGPHFNPASKKHAGPKDEDRHVGDLGNVTADANGVAKIDITD-KISLTGPYSIIGRTMVIHEKADDLGRGGNEESLKTGNAGSRLAC 146
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC1_DEBHA (Superoxide dismutase [Cu-Zn] 1 OS=Debaryomyces hansenii GN=SOD1 PE=1 SV=4) HSP 1 Score: 146.362 bits (368), Expect = 1.335e-34 Identity = 78/147 (53.06%), Postives = 88/147 (59.86%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 M KAVAVL G V G V+F Q + PTT++ +SG GFHVH GD TNGC S GPHFNP KEHGAPEDDNRH A + D + L G NSI+GR VV+HA DDLGKGG+ SK TGNAG R AC Sbjct: 1 MAKAVAVLRGDSKVSGVVNFEQSSESDPTTITWEISGNDANALRGFHVHTFGDNTNGCTSAGPHFNPFTKEHGAPEDDNRHVGDLGNVTTDTSGVAKGSKQDLFVKLIGQNSILGRTVVIHAGTDDLGKGGNAESKKTGNAGARPAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_PANTR (Superoxide dismutase [Cu-Zn] OS=Pan troglodytes GN=SOD1 PE=2 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.744e-34 Identity = 73/144 (50.69%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KAV VL G V+G ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+D+ RH A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+AC Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_HUMAN (Superoxide dismutase [Cu-Zn] OS=Homo sapiens GN=SOD1 PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.744e-34 Identity = 73/144 (50.69%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KAV VL G V+G ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+D+ RH A ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+AC Sbjct: 4 KAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_ASPNG (Superoxide dismutase [Cu-Zn] OS=Aspergillus niger GN=sodC PE=1 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.744e-34 Identity = 76/147 (51.70%), Postives = 90/147 (61.22%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAV+ G V GTV+F Q + PTT+S +++G GFHVH GD TNGC S GPHFNP GK HGAPEDD RH A + D + L G S++GR +VVHA DDLG+GG+E SK TGNAG R AC Sbjct: 1 MVKAVAVIRGDSKVSGTVTFEQANENTPTTISWNITGHDANAERGFHVHQFGDNTNGCTSAGPHFNPYGKTHGAPEDDERHVGDLGNFKTDAEGNAVGSKQDKLVKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGPRPAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_ASPNC (Superoxide dismutase [Cu-Zn] OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sodC PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.744e-34 Identity = 76/147 (51.70%), Postives = 90/147 (61.22%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGPH-GFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAV+ G V GTV+F Q + PTT+S +++G GFHVH GD TNGC S GPHFNP GK HGAPEDD RH A + D + L G S++GR +VVHA DDLG+GG+E SK TGNAG R AC Sbjct: 1 MVKAVAVIRGDSKVSGTVTFEQANENTPTTISWNITGHDANAERGFHVHQFGDNTNGCTSAGPHFNPFGKTHGAPEDDERHVGDLGNFKTDAEGNAVGSKQDKLVKLIGAESVLGRTLVVHAGTDDLGRGGNEESKKTGNAGPRPAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_NEUCR (Superoxide dismutase [Cu-Zn] OS=Neurospora crassa GN=sod-1 PE=1 SV=3) HSP 1 Score: 145.591 bits (366), Expect = 2.278e-34 Identity = 78/147 (53.06%), Postives = 88/147 (59.86%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAV+ G VKGTV F QE + PTT++ +SG P GFH+H GD TNGC S GPHFNP G HG + RH A TV DN + L GP S+IGR VVVHA DDLGKGG+E S TGNAG R AC Sbjct: 1 MVKAVAVVRGDSNVKGTVIFEQESESAPTTITYDISGNDPNAKRGFHIHTFGDNTNGCTSAGPHFNPHGTTHGDRTAEVRHVGDLGNIETDAQGNAKGTVTDNLVKLIGPESVIGRTVVVHAGTDDLGKGGNEESLKTGNAGPRPAC 147
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_RABIT (Superoxide dismutase [Cu-Zn] OS=Oryctolagus cuniculus GN=SOD1 PE=1 SV=3) HSP 1 Score: 144.821 bits (364), Expect = 3.885e-34 Identity = 70/143 (48.95%), Postives = 85/143 (59.44%), Query Frame = 3 Query: 75 KAVAVLGGTEGVKGTVSFTQEGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KAV VL G V+ T+ F Q+G GP V G ++GL G H FHVH GD GC S GPHFNP K+HG P+D+ RH A + D+ I LSG S+IGR +VVH DDLGKGG++ S TGNAG R+AC Sbjct: 4 KAVCVLKGDGPVEATIHFEQKGTGPVVVKGRITGLTEGLHEFHVHQFGDNRQGCTSAGPHFNPLSKKHGGPKDEERHVGDLGNVTAGSNGVADVLIEDSVISLSGDMSVIGRTLVVHEKEDDLGKGGNDESTKTGNAGSRLAC 146
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_PONPY (Superoxide dismutase [Cu-Zn] OS=Pongo pygmaeus GN=SOD1 PE=2 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 6.627e-34 Identity = 74/145 (51.03%), Postives = 90/145 (62.07%), Query Frame = 3 Query: 75 KAVAVLGGTEG-VKGTVSFTQ-EGDGPTTVSGSLSGLKPGPHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 KAV VL G VKG ++F Q E +GP V GS+ GL G HGFHVH GD T GC S GPHFNP ++HG P+D+ RH A+ ++ D+ I LSG + IIGR +VVH DDLGKGG+E S TGNAG R+AC Sbjct: 4 KAVCVLKGDNSPVKGIINFEQKERNGPVKVWGSIEGLTEGLHGFHVHEFGDNTVGCTSAGPHFNPLSRKHGGPKDEERHVGDLGNVTADKDGVASVSIEDSVISLSGDHCIIGRTLVVHEKADDLGKGGNEESTKTGNAGSRLAC 148
BLAST of FC925396 vs. ExPASy Swiss-Prot
Match: SODC_CLAPU (Superoxide dismutase [Cu-Zn] OS=Claviceps purpurea GN=SOD1 PE=3 SV=3) HSP 1 Score: 144.05 bits (362), Expect = 6.627e-34 Identity = 76/147 (51.70%), Postives = 89/147 (60.54%), Query Frame = 3 Query: 69 MVKAVAVLGGTEGVKGTVSFTQEGDG-PTTVSGSLSGLKPGP-HGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDDNRHAXXXXXXXXXXXXTATFTVVDNQIPLSGPNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVAC 503 MVKAVAVL G V GTV F QE + PTT++ ++G GFH+H GD TNGC S GPHFNP GK HGAP D+ RH A +V D + L GP+S+IGR VV+HA DDLGKG +E S TGNAG R AC Sbjct: 1 MVKAVAVLRGDAKVGGTVVFEQESESAPTTITWDITGNDANAKRGFHIHTFGDNTNGCTSAGPHFNPHGKTHGAPTDEARHVGDLGNLETDGQGNAKGSVKDEHVKLIGPHSVIGRTVVIHAGTDDLGKGDNEESLKTGNAGPRPAC 147 The following BLAST results are available for this feature:
BLAST of FC925396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 142
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925396 ID=FC925396; Name=FC925396; organism=Citrus clementina; type=EST; length=678bpback to top |