FC925401

Overview
NameFC925401
Unique NameFC925401
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length527
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEBR (Heat shock 70 kDa protein C OS=Caenorhabditis briggsae GN=hsp-3 PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 3.377e-17
Identity = 41/86 (47.67%), Postives = 63/86 (73.26%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            +D +VK+K EA+N+LE+YAYS++N + D +K+ GKL   DK+ IE+AVDE + WL  N  A  +E +++ KELEG   PI++K+Y+
Sbjct:  556 DDKKVKEKAEARNELESYAYSLKNQIGDKEKLGGKLDEDDKKTIEEAVDEAISWLGSNADASAEELKEQKKELEGKVQPIVSKLYK 641          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 4.411e-17
Identity = 36/86 (41.86%), Postives = 62/86 (72.09%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            +A+D +  ++V+AKN+LE+YA++++NT+ +     K+   D +++E A  ET++WLD +Q A  DE++D+ KELEG+ NPI+ K Y
Sbjct:  524 RADDEREAERVQAKNQLESYAFTLKNTINEASFKEKVGEDDAKRLETASQETIDWLDASQAASTDEYKDRQKELEGIANPIMTKFY 609          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_PLACB (Heat shock 70 kDa protein OS=Plasmodium cynomolgi (strain Berok) PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.411e-17
Identity = 38/87 (43.68%), Postives = 62/87 (71.26%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED + KK++EA+N LENY Y ++++++D K+  KL  ++ +   K++   +EWL+ NQLA  +E+E K KE E +C PI++K+YQ
Sbjct:  539 KAEDEENKKRIEARNSLENYCYGVKSSLEDQKIKEKLQPSEIETCMKSITTILEWLEKNQLASKEEYESKQKEAESVCAPIMSKIYQ 625          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP74_PARLI (Heat shock 70 kDa protein IV OS=Paracentrotus lividus GN=HSP70IV PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 38/86 (44.19%), Postives = 62/86 (72.09%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            KAED   ++++ AKN+LE YA+++++ V D     KL+  DK+ + KAV++ ++WLD N LA+ +EF  KL+EL+  C+PI+AKM+
Sbjct:  526 KAEDDAQRERINAKNQLEGYAFNLKSAVDDAAAQSKLSPGDKETVTKAVNDVLQWLDSNSLADKEEFTYKLEELQKTCSPIMAKMH 611          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 5.760e-17
Identity = 39/87 (44.83%), Postives = 61/87 (70.11%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED + +K++EA+N LENY Y ++++++D K+  KL  A+ +   K +   +EWL+ NQLA  DE+E K KE E +C PI++K+YQ
Sbjct:  539 KAEDEENRKRIEARNSLENYCYGVKSSLEDQKIKEKLQPAEIETCMKTITTILEWLEKNQLAGKDEYEAKQKEAESVCAPIMSKIYQ 625          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 86.6557 bits (213), Expect = 7.523e-17
Identity = 36/86 (41.86%), Postives = 62/86 (72.09%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            KAED Q  ++V+AKN+LE+YA++++N+V ++    K+   D +K+E A  + + WLD +Q A  +E++++ KELEG+ NPI++K Y
Sbjct:  524 KAEDEQEAQRVQAKNQLESYAFTLKNSVSENNFKEKVGEEDARKLEAAAQDAINWLDASQAASTEEYKERQKELEGVANPIMSKFY 609          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 86.6557 bits (213), Expect = 7.523e-17
Identity = 39/87 (44.83%), Postives = 60/87 (68.97%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            K ED +  +++ +KN+LE+ AYS++NT+ +     KL  ADK  + K  +ET+ WLD N  A  +EF+DKLKEL+ + NPI++K+YQ
Sbjct:  523 KEEDEKESQRIASKNQLESIAYSLKNTISE--AGDKLEQADKDTVTKKAEETISWLDSNTTASKEEFDDKLKELQDIANPIMSKLYQ 607          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.826e-17
Identity = 37/87 (42.53%), Postives = 63/87 (72.41%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KA+D   +++V+AKN LE+YA+++++ V+D+ V GK++  DK+ I +   + + WL+ NQLAE +E+  + K+LE +C PII K+YQ
Sbjct:  527 KADDDAQRERVDAKNALESYAFNLKSMVEDENVKGKISDEDKRTISEKCTQVISWLENNQLAEKEEYAFQQKDLEKVCQPIITKLYQ 613          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.826e-17
Identity = 38/87 (43.68%), Postives = 63/87 (72.41%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KA+D   ++KV AKN LE+ A++M++TV+ D +  K++  D++KI    ++T+ W++ NQ+AE +E+E + KELE +CN II K+YQ
Sbjct:  528 KADDEAQREKVSAKNTLESIAFNMKSTVEGDNLKDKISEDDRKKIVDKCNQTISWMENNQMAEKEEYEHQQKELEKVCNSIITKLYQ 614          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: BIP2_DICDI (Luminal-binding protein 2 OS=Dictyostelium discoideum GN=bip2 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 9.826e-17
Identity = 40/85 (47.06%), Postives = 59/85 (69.41%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            ED   K++VEAKN LENY Y ++NT+ D DK+ GK+ + DK+ IE A+ + + WLD N  AE +EF+++ K LE +  PI +K+Y
Sbjct:  554 EDKAAKERVEAKNTLENYIYQIKNTIGDKDKIGGKIESDDKETIETAISDALSWLDVNSSAEKEEFDEQYKILEKIVQPIFSKLY 638          
The following BLAST results are available for this feature:
BLAST of FC925401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
HSP7C_CAEBR3.377e-1747.67Heat shock 70 kDa protein C OS=Caenorhabditis brig... [more]
HSP73_YEAST4.411e-1741.86Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP70_PLACB4.411e-1743.68Heat shock 70 kDa protein OS=Plasmodium cynomolgi ... [more]
HSP74_PARLI5.760e-1744.19Heat shock 70 kDa protein IV OS=Paracentrotus livi... [more]
HSP70_PLAFA5.760e-1744.83Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP74_YEAST7.523e-1741.86Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]
HSP71_YEAST7.523e-1744.83Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP70_XENLA9.826e-1742.53Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_PLEWA9.826e-1743.68Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
BIP2_DICDI9.826e-1747.06Luminal-binding protein 2 OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YH12FM1 TF Citrus clementina cDNA clone KN0AAP3YH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925401 ID=FC925401; Name=FC925401; organism=Citrus clementina; type=EST; length=527bp
CAAGGCTGAAGACTTTCAAGTGAAGAAGAAGGTGGAGGCGAAGAACAAGT
TAGAGAATTACGCGTACAGTATGAGGAATACAGTGAAGGATGACAAGGTT
GCAGGAAAATTGGCCGCAGCAGACAAGCAAAAGATTGAGAAGGCAGTTGA
TGAGACTGTCGAGTGGCTTGACGGGAATCAACTGGCTGAAGTTGATGAGT
TCGAGGACAAGTTGAAGGAGTTGGAGGGCTTGTGCAATCCCATAATAGCA
AAGATGTATCAAGGTGACGGTGGGGATGTTCCAATGGGTGGCGGCTATGG
CTCCTCCGGGTCTGGTGGTTCTGGTGCCGGTGCTGGGCCTAAGATTGAGG
AAGTTGATTGAAGTTAAAACGTTGTCGCTAGGGAAGTCCTTCCTGCTATG
TTCCGTTCCTTCTGCTCTGTTTTTTCTTATGATGGTGTGTGTTGTCAAAT
GATGCAAAGGTTTAGGAATCGTTTGAGAGATAAATATACATAATGTTACG
GATGTAATTTTTTTTTCCCCCTCTTTC
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