FC925401

Overview
NameFC925401
Unique NameFC925401
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length527
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_PENCI (Heat shock 70 kDa protein (Fragment) OS=Penicillium citrinum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.189e-16
Identity = 40/86 (46.51%), Postives = 59/86 (68.60%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            KAED     +++AKN LE+YAYS++NT+ + K+  +++  DK+KIE  + E + WLD NQ AE DE+E + KELE + NPI+   Y
Sbjct:  394 KAEDEAEASRIQAKNGLESYAYSLKNTITEGKL--QMSDDDKKKIEDKISEIISWLDNNQTAEKDEYESQQKELEAIANPIMQAAY 477          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 3.734e-16
Identity = 37/86 (43.02%), Postives = 57/86 (66.28%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            K ED +   ++ AKN LE+YAYS++ T  + +   K+ A+ ++ + KA++ET+ WLD NQ A  DE+EDK KELEG+ N  +  +Y
Sbjct:  526 KEEDEKEAARIAAKNGLESYAYSLKQTASEKQFEEKVDASKRESLNKAIEETISWLDNNQSATTDEYEDKRKELEGIANDALKDLY 611          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_SCHJA (Heat shock 70 kDa protein (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 4.877e-16
Identity = 40/86 (46.51%), Postives = 60/86 (69.77%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAAD-KQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKM 256
            K+ED + K ++ AKN LE+Y YSM+ +V+ D++  K++ +D K +I    +ET+ W+D NQLAE +EFE+K  ELE +C PII  M
Sbjct:   81 KSEDEKQKNRICAKNSLESYVYSMKQSVEGDEMKDKISESDRKNRILSKCEETIRWMDNNQLAEKEEFEEKKSELEKVCMPIITAM 166          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 83.5741 bits (205), Expect = 6.369e-16
Identity = 38/87 (43.68%), Postives = 60/87 (68.97%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            K ED +  +++ +KN+LE+ AYS++NT+ +     KL  ADK  + K  +ET+ WLD N  A  +EF+D+LKEL+ + NPI++K+YQ
Sbjct:  523 KEEDEKESQRIASKNQLESIAYSLKNTISE--AGDKLEQADKDAVTKKAEETIAWLDSNTTATKEEFDDQLKELQEVANPIMSKLYQ 607          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFO (78 kDa glucose-regulated protein homolog OS=Plasmodium falciparum (isolate NF54) PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 8.318e-16
Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            ED  +++KVEAKNKL+NY  SM+ TV+D DK+A K+   DK  I  AV +  +WL+ N  A+ +  + KLK+LE +C PII K+Y
Sbjct:  550 EDKNLREKVEAKNKLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLY 634          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7C_CAEEL (Heat shock 70 kDa protein C OS=Caenorhabditis elegans GN=hsp-3 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 1.419e-15
Identity = 37/86 (43.02%), Postives = 62/86 (72.09%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            +D +VK K EA+N+LE+YAY+++N ++D +K+ GKL   DK+ IE+AV+E + WL  N  A  +E +++ K+LE    PI++K+Y+
Sbjct:  556 DDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYK 641          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: GRP78_PLAFA (78 kDa glucose-regulated protein homolog (Fragment) OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.161e-15
Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            ED  +++KVEAKN L+NY  SM+ TV+D DK+A K+   DK  I  AV +  +WL+ N  A+ +  + KLK+LE +C PII K+Y
Sbjct:  174 EDKNLREKVEAKNNLDNYIQSMKATVEDKDKLADKIEKEDKNTILSAVKDAEDWLNNNSNADSEALKQKLKDLEAVCQPIIVKLY 258          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7D_CAEEL (Heat shock 70 kDa protein D OS=Caenorhabditis elegans GN=hsp-4 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 4.128e-15
Identity = 39/86 (45.35%), Postives = 58/86 (67.44%), Query Frame = 2
Query:    5 AEDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            A+D   K+KVE++N+LE YAY M+  + D +K+ GKL   DK  IE AV+  +EWL  NQ A  +E +++ KELE +  PI++K+Y
Sbjct:  552 ADDQAQKEKVESRNELEAYAYQMKTQIADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDASTEENKEQKKELESVVQPIVSKLY 637          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: GRP78_YARLI (78 kDa glucose-regulated protein homolog OS=Yarrowia lipolytica GN=KAR2 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.676e-14
Identity = 38/87 (43.68%), Postives = 60/87 (68.97%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKDDK-VAGKLAAADKQKIEKAVDETVEWLDGNQL-AEVDEFEDKLKELEGLCNPIIAKMYQ 262
            ED  +++ +EAKN LENYA+S+RN V D   + GK++A DK+ +  AV ET+EWL+ N + A  ++FE+K + L  +  PI +K+Y+
Sbjct:  558 EDALIRETIEAKNSLENYAHSLRNQVADKSGLGGKISADDKEALNDAVTETLEWLEANSVSATKEDFEEKKEALSAIAYPITSKIYE 644          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: GRP78_ECHMU (78 kDa glucose-regulated protein OS=Echinococcus multilocularis GN=GRP78 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 4.564e-14
Identity = 35/86 (40.70%), Postives = 60/86 (69.77%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            +D QVK++VE +N LE+ AYS++N VKD +K+ GKL+  + + IE A DE ++W++ N  AE  +++ +   LE +  PI++K+Y+
Sbjct:  550 QDKQVKERVEVRNDLESLAYSIKNQVKDKEKMGGKLSDDEIKTIEDAADEAIKWMENNPQAETSDYKKQKANLESVVQPIVSKLYE 635          
The following BLAST results are available for this feature:
BLAST of FC925401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
HSP70_PENCI2.189e-1646.51Heat shock 70 kDa protein (Fragment) OS=Penicilliu... [more]
HSP71_PICAN3.734e-1643.02Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP70_SCHJA4.877e-1646.51Heat shock 70 kDa protein (Fragment) OS=Schistosom... [more]
HSP72_YEAST6.369e-1643.68Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
GRP78_PLAFO8.318e-1648.2478 kDa glucose-regulated protein homolog OS=Plasmo... [more]
HSP7C_CAEEL1.419e-1543.02Heat shock 70 kDa protein C OS=Caenorhabditis eleg... [more]
GRP78_PLAFA3.161e-1547.0678 kDa glucose-regulated protein homolog (Fragment... [more]
HSP7D_CAEEL4.128e-1545.35Heat shock 70 kDa protein D OS=Caenorhabditis eleg... [more]
GRP78_YARLI2.676e-1443.6878 kDa glucose-regulated protein homolog OS=Yarrow... [more]
GRP78_ECHMU4.564e-1440.7078 kDa glucose-regulated protein OS=Echinococcus m... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YH12FM1 TF Citrus clementina cDNA clone KN0AAP3YH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925401 ID=FC925401; Name=FC925401; organism=Citrus clementina; type=EST; length=527bp
CAAGGCTGAAGACTTTCAAGTGAAGAAGAAGGTGGAGGCGAAGAACAAGT
TAGAGAATTACGCGTACAGTATGAGGAATACAGTGAAGGATGACAAGGTT
GCAGGAAAATTGGCCGCAGCAGACAAGCAAAAGATTGAGAAGGCAGTTGA
TGAGACTGTCGAGTGGCTTGACGGGAATCAACTGGCTGAAGTTGATGAGT
TCGAGGACAAGTTGAAGGAGTTGGAGGGCTTGTGCAATCCCATAATAGCA
AAGATGTATCAAGGTGACGGTGGGGATGTTCCAATGGGTGGCGGCTATGG
CTCCTCCGGGTCTGGTGGTTCTGGTGCCGGTGCTGGGCCTAAGATTGAGG
AAGTTGATTGAAGTTAAAACGTTGTCGCTAGGGAAGTCCTTCCTGCTATG
TTCCGTTCCTTCTGCTCTGTTTTTTCTTATGATGGTGTGTGTTGTCAAAT
GATGCAAAGGTTTAGGAATCGTTTGAGAGATAAATATACATAATGTTACG
GATGTAATTTTTTTTTCCCCCTCTTTC
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