FC925401

Overview
NameFC925401
Unique NameFC925401
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length527
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.260e-21
Identity = 48/87 (55.17%), Postives = 63/87 (72.41%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            +A+D   + +VEAKN LENYAYSM+NT+ D  V+GKL  +DK  + K +D T+EWL  NQ A  +E+E K KELE +CNPI+ KMYQ
Sbjct:  528 EADDRAQRDRVEAKNGLENYAYSMKNTLGDSNVSGKLDDSDKATLNKEIDVTLEWLSSNQEATKEEYEHKQKELESVCNPIMTKMYQ 614          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: BIP8_TOBAC (Luminal-binding protein 8 (Fragment) OS=Nicotiana tabacum GN=BIP8 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.855e-21
Identity = 46/86 (53.49%), Postives = 66/86 (76.74%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            ED +VK++++A+N LE Y Y+MRN + D DK+A KL + +K+KIE A  E +EWLD NQ AE +++E+KLKE+E +CNPII  +YQ
Sbjct:  187 EDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 272          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.855e-21
Identity = 46/86 (53.49%), Postives = 66/86 (76.74%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            ED +VK++++A+N LE Y Y+MRN + D DK+A KL + +K+KIE A  E +EWLD NQ AE +++E+KLKE+E +CNPII  +YQ
Sbjct:  561 EDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 646          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_ALTAL (Heat shock 70 kDa protein (Fragment) OS=Alternaria alternata GN=HSP70 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 5.035e-21
Identity = 48/86 (55.81%), Postives = 61/86 (70.93%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            KAED     ++ AKN LE+YAYS+RNT+ D KV  KL A DKQK+   +D+TV+WLD NQ A  DE+E + KELEG+ NPI+ K Y
Sbjct:   30 KAEDEAEAARISAKNALESYAYSLRNTLSDSKVDEKLDAGDKQKLTAEIDKTVQWLDDNQTATKDEYESQQKELEGVANPIMMKFY 115          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.035e-21
Identity = 46/86 (53.49%), Postives = 67/86 (77.91%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            ED +VK+K++A+N LE Y Y+M+N + D DK+A KL + +K+KIE AV E +EWLD NQ AE +++++KLKE+E +CNPII  +YQ
Sbjct:  560 EDKKVKEKIDARNSLETYIYNMKNQISDADKLADKLESDEKEKIEGAVKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQ 645          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: BIP3_TOBAC (Luminal-binding protein 3 (Fragment) OS=Nicotiana tabacum GN=BIP3 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.035e-21
Identity = 46/86 (53.49%), Postives = 67/86 (77.91%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            ED +VK++++A+N LE Y Y+M+N + D DK+A KL + +K+KIE AV E +EWLD NQ AE +++E+KLKE+E +CNPII  +YQ
Sbjct:   63 EDKKVKERIDARNGLETYVYNMKNQINDKDKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQ 148          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7C_ORYLA (Heat shock cognate 71 kDa protein OS=Oryzias latipes GN=hsc70 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.576e-21
Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   + KV AKN LE+YA++M++TV+D+K+AGK++  DKQKI    +E + WLD NQ AE DE+  + KELE +CNPII K+YQ
Sbjct:  524 KAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLAGKISDEDKQKILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCNPIITKLYQ 610          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 6.576e-21
Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED     +++AKN LE+YAYS+RN++ D  +  K+ A+DK+ ++KAV ET+EWLD N  A  DEFE K KELE + NPI+AK+YQ
Sbjct:  524 KAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAKDEFEAKQKELESVANPIMAKIYQ 610          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: BIP1_TOBAC (Luminal-binding protein 1 (Fragment) OS=Nicotiana tabacum GN=BIP1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.576e-21
Identity = 45/86 (52.33%), Postives = 66/86 (76.74%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            ED +VK++++A+N LE Y Y+M+N + D DK+A KL + +K+KIE A  E +EWLD NQ AE +++E+KLKE+E +CNPII  +YQ
Sbjct:  184 EDKKVKERIDARNSLETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAICNPIITAVYQ 269          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7C_DANRE (Heat shock cognate 71 kDa protein OS=Danio rerio GN=hspa8 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.588e-21
Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   + KV AKN LE+YA++M++TV+D+K+ GK++  DKQKI    +E + WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  526 KAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQ 612          
The following BLAST results are available for this feature:
BLAST of FC925401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
HSP70_LEIDO2.260e-2155.17Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
BIP8_TOBAC3.855e-2153.49Luminal-binding protein 8 (Fragment) OS=Nicotiana ... [more]
BIP4_TOBAC3.855e-2153.49Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
HSP70_ALTAL5.035e-2155.81Heat shock 70 kDa protein (Fragment) OS=Alternaria... [more]
BIP_SPIOL5.035e-2153.49Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
BIP3_TOBAC5.035e-2153.49Luminal-binding protein 3 (Fragment) OS=Nicotiana ... [more]
HSP7C_ORYLA6.576e-2155.17Heat shock cognate 71 kDa protein OS=Oryzias latip... [more]
HSP72_SCHPO6.576e-2154.02Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
BIP1_TOBAC6.576e-2152.33Luminal-binding protein 1 (Fragment) OS=Nicotiana ... [more]
HSP7C_DANRE8.588e-2155.17Heat shock cognate 71 kDa protein OS=Danio rerio G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YH12FM1 TF Citrus clementina cDNA clone KN0AAP3YH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925401 ID=FC925401; Name=FC925401; organism=Citrus clementina; type=EST; length=527bp
CAAGGCTGAAGACTTTCAAGTGAAGAAGAAGGTGGAGGCGAAGAACAAGT
TAGAGAATTACGCGTACAGTATGAGGAATACAGTGAAGGATGACAAGGTT
GCAGGAAAATTGGCCGCAGCAGACAAGCAAAAGATTGAGAAGGCAGTTGA
TGAGACTGTCGAGTGGCTTGACGGGAATCAACTGGCTGAAGTTGATGAGT
TCGAGGACAAGTTGAAGGAGTTGGAGGGCTTGTGCAATCCCATAATAGCA
AAGATGTATCAAGGTGACGGTGGGGATGTTCCAATGGGTGGCGGCTATGG
CTCCTCCGGGTCTGGTGGTTCTGGTGCCGGTGCTGGGCCTAAGATTGAGG
AAGTTGATTGAAGTTAAAACGTTGTCGCTAGGGAAGTCCTTCCTGCTATG
TTCCGTTCCTTCTGCTCTGTTTTTTCTTATGATGGTGTGTGTTGTCAAAT
GATGCAAAGGTTTAGGAATCGTTTGAGAGATAAATATACATAATGTTACG
GATGTAATTTTTTTTTCCCCCTCTTTC
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