FC925401

Overview
NameFC925401
Unique NameFC925401
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length527
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7C_HUMAN (Heat shock cognate 71 kDa protein OS=Homo sapiens GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.465e-20
Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED + + KV +KN LE+YA++M+ TV+D+K+ GK+   DKQKI    +E + WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  526 KAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7C_HORSE (Heat shock cognate 71 kDa protein OS=Equus caballus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.465e-20
Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED + + KV +KN LE+YA++M+ TV+D+K+ GK+   DKQKI    +E + WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  526 KAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7C_CRIGR (Heat shock cognate 71 kDa protein OS=Cricetulus griseus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.465e-20
Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED + + KV +KN LE+YA++M+ TV+D+K+ GK+   DKQKI    +E + WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  526 KAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7C_BOVIN (Heat shock cognate 71 kDa protein OS=Bos taurus GN=HSPA8 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.465e-20
Identity = 47/87 (54.02%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED + + KV +KN LE+YA++M+ TV+D+K+ GK+   DKQKI    +E + WLD NQ AE +EFE + KELE +CNPII K+YQ
Sbjct:  526 KAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.465e-20
Identity = 42/87 (48.28%), Postives = 66/87 (75.86%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   ++K+ AKN LE+YA++M+++V+DD + GK++  DK+K+    D+T+ WL+ NQL + +E+E +LKELE +C PII K+YQ
Sbjct:  528 KAEDDAQREKIAAKNSLESYAFNMKSSVEDDNMKGKISQEDKKKVVDRCDQTISWLENNQLGDKEEYEHQLKELEKVCQPIITKLYQ 614          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HS71B_BOVIN (Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.465e-20
Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   +++V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+++YQ
Sbjct:  526 KAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQ 612          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HS71B_BOSMU (Heat shock 70 kDa protein 1B OS=Bos mutus grunniens GN=HSPA1B PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.465e-20
Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   +++V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+++YQ
Sbjct:  526 KAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQ 612          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 1.465e-20
Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   +++V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+++YQ
Sbjct:  526 KAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISRLYQ 612          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7D_MANSE (Heat shock 70 kDa protein cognate 4 OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.913e-20
Identity = 42/85 (49.41%), Postives = 67/85 (78.82%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            ED + K+ ++AKN LE+Y ++M++T++D+K+  K++ +DKQ I    ++T++WLD NQLA+ +E+E K KELEG+CNPII K+YQ
Sbjct:  528 EDEKQKETIQAKNALESYCFNMKSTMEDEKLKDKISDSDKQTILDKCNDTIKWLDSNQLADKEEYEHKQKELEGICNPIITKLYQ 612          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.913e-20
Identity = 46/87 (52.87%), Postives = 62/87 (71.26%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            +AED    ++++AKN LENYA+SM+N V D  VAGK+  ADK+ I  AV+E +EWL+ NQ A  +E+E + KELE LC PI+  MYQ
Sbjct:  529 EAEDKDQVRQIDAKNGLENYAFSMKNAVNDPNVAGKIEEADKKTITSAVEEALEWLNNNQEASKEEYEHRQKELENLCTPIMTNMYQ 615          
The following BLAST results are available for this feature:
BLAST of FC925401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
HSP7C_HUMAN1.465e-2054.02Heat shock cognate 71 kDa protein OS=Homo sapiens ... [more]
HSP7C_HORSE1.465e-2054.02Heat shock cognate 71 kDa protein OS=Equus caballu... [more]
HSP7C_CRIGR1.465e-2054.02Heat shock cognate 71 kDa protein OS=Cricetulus gr... [more]
HSP7C_BOVIN1.465e-2054.02Heat shock cognate 71 kDa protein OS=Bos taurus GN... [more]
HSP70_ONCTS1.465e-2048.28Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HS71B_BOVIN1.465e-2051.72Heat shock 70 kDa protein 1B OS=Bos taurus GN=HSPA... [more]
HS71B_BOSMU1.465e-2051.72Heat shock 70 kDa protein 1B OS=Bos mutus grunnien... [more]
HS71A_BOVIN1.465e-2051.72Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP7D_MANSE1.913e-2049.41Heat shock 70 kDa protein cognate 4 OS=Manduca sex... [more]
HSP70_TRYCR1.913e-2052.87Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YH12FM1 TF Citrus clementina cDNA clone KN0AAP3YH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925401 ID=FC925401; Name=FC925401; organism=Citrus clementina; type=EST; length=527bp
CAAGGCTGAAGACTTTCAAGTGAAGAAGAAGGTGGAGGCGAAGAACAAGT
TAGAGAATTACGCGTACAGTATGAGGAATACAGTGAAGGATGACAAGGTT
GCAGGAAAATTGGCCGCAGCAGACAAGCAAAAGATTGAGAAGGCAGTTGA
TGAGACTGTCGAGTGGCTTGACGGGAATCAACTGGCTGAAGTTGATGAGT
TCGAGGACAAGTTGAAGGAGTTGGAGGGCTTGTGCAATCCCATAATAGCA
AAGATGTATCAAGGTGACGGTGGGGATGTTCCAATGGGTGGCGGCTATGG
CTCCTCCGGGTCTGGTGGTTCTGGTGCCGGTGCTGGGCCTAAGATTGAGG
AAGTTGATTGAAGTTAAAACGTTGTCGCTAGGGAAGTCCTTCCTGCTATG
TTCCGTTCCTTCTGCTCTGTTTTTTCTTATGATGGTGTGTGTTGTCAAAT
GATGCAAAGGTTTAGGAATCGTTTGAGAGATAAATATACATAATGTTACG
GATGTAATTTTTTTTTCCCCCTCTTTC
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