FC925401

Overview
NameFC925401
Unique NameFC925401
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length527
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_ACHKL (Heat shock 70 kDa protein OS=Achlya klebsiana GN=HSP70 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.913e-20
Identity = 46/86 (53.49%), Postives = 63/86 (73.26%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            K+ED     ++EAKN LENYAY++RNT+ D+K+ GK+  +DK+ I+  V + + WLD NQ AE +EFE K KELEG+ NPI+ KMY
Sbjct:  529 KSEDEANNVRIEAKNGLENYAYNLRNTLNDEKLQGKIDESDKKVIDDKVTDIINWLDHNQSAEKEEFEAKQKELEGIANPIMQKMY 614          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 1.913e-20
Identity = 46/86 (53.49%), Postives = 65/86 (75.58%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            ED +VK+K++A+N LE Y Y+M+N V D DK+A KL   +K+KIE A  E +EWLD NQ +E +E+++KLKE+E +CNPII  +YQ
Sbjct:  559 EDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.913e-20
Identity = 46/86 (53.49%), Postives = 65/86 (75.58%), Query Frame = 2
Query:    8 EDFQVKKKVEAKNKLENYAYSMRNTVKD-DKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            ED +VK+K++A+N LE Y Y+M+N V D DK+A KL   +K+KIE A  E +EWLD NQ +E +E+++KLKE+E +CNPII  +YQ
Sbjct:  559 EDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQ 644          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.499e-20
Identity = 46/87 (52.87%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   + KV AKN LE+YA++M++TV+D+K+ GK++  DK KI    +E + WLD NQ AE DE+E + K+LE +CNPII K+YQ
Sbjct:  526 KAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQ 612          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 2.499e-20
Identity = 44/87 (50.57%), Postives = 66/87 (75.86%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KA+D   K ++ AKN LE+YA++++ T++D+K+  K++  DK+KIE   DE ++WLD NQ AE +EFE + K+LEGL NPII+K+YQ
Sbjct:  527 KADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQ 613          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP72_HUMAN (Heat shock-related 70 kDa protein 2 OS=Homo sapiens GN=HSPA2 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.499e-20
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            K+ED   + +V AKN LE+Y Y+++ TV+D+K+ GK++  DK KI     E + WLD NQ+AE DE+E K KELE +CNPII+K+YQ
Sbjct:  529 KSEDEANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 615          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.499e-20
Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   ++K+ AKN LE+YA++M++ V D+ + GK++ ADK+KI    +E + WL+ NQLAE DEF+ K +ELE +CNPII K+YQ
Sbjct:  528 KAEDEVQREKIAAKNALESYAFNMKSAVSDEGLKGKISDADKKKILNKCNEALSWLEANQLAEKDEFDHKRRELEQVCNPIITKLYQ 614          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.499e-20
Identity = 45/87 (51.72%), Postives = 65/87 (74.71%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   ++K+ AKN LE+YA++M++ V D+ + GK++ +DK+KI    +E + WL+ NQLAE DEF+ K KELE +CNPII K+YQ
Sbjct:  528 KAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKKKILDKCNELLSWLEANQLAEKDEFDHKRKELEQMCNPIITKLYQ 614          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 3.263e-20
Identity = 42/86 (48.84%), Postives = 65/86 (75.58%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMY 259
            KA+D   ++ VE+KNKLENYAY++R+T+KDDK+A KL+  D++ +E+  DE + WL  N  A  +E+E  +K+LE +C+PII+K+Y
Sbjct:  525 KAQDEAQREVVESKNKLENYAYTVRSTIKDDKIAAKLSKEDRKTVEEKSDEAINWLHANDSATKEEYEKAMKDLEAVCSPIISKVY 610          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.262e-20
Identity = 45/87 (51.72%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   +++V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+ +YQ
Sbjct:  526 KAEDEVQRERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612          
The following BLAST results are available for this feature:
BLAST of FC925401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
HSP70_ACHKL1.913e-2053.49Heat shock 70 kDa protein OS=Achlya klebsiana GN=H... [more]
BIP2_ARATH1.913e-2053.49Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
BIP1_ARATH1.913e-2053.49Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
HSP7C_ICTPU2.499e-2052.87Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP7A_CAEEL2.499e-2050.57Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP72_HUMAN2.499e-2051.72Heat shock-related 70 kDa protein 2 OS=Homo sapien... [more]
HS71L_PIG2.499e-2051.72Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_MACFA2.499e-2051.72Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]
HS7C2_DICDI3.263e-2048.84Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP71_PONAB4.262e-2051.72Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YH12FM1 TF Citrus clementina cDNA clone KN0AAP3YH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925401 ID=FC925401; Name=FC925401; organism=Citrus clementina; type=EST; length=527bp
CAAGGCTGAAGACTTTCAAGTGAAGAAGAAGGTGGAGGCGAAGAACAAGT
TAGAGAATTACGCGTACAGTATGAGGAATACAGTGAAGGATGACAAGGTT
GCAGGAAAATTGGCCGCAGCAGACAAGCAAAAGATTGAGAAGGCAGTTGA
TGAGACTGTCGAGTGGCTTGACGGGAATCAACTGGCTGAAGTTGATGAGT
TCGAGGACAAGTTGAAGGAGTTGGAGGGCTTGTGCAATCCCATAATAGCA
AAGATGTATCAAGGTGACGGTGGGGATGTTCCAATGGGTGGCGGCTATGG
CTCCTCCGGGTCTGGTGGTTCTGGTGCCGGTGCTGGGCCTAAGATTGAGG
AAGTTGATTGAAGTTAAAACGTTGTCGCTAGGGAAGTCCTTCCTGCTATG
TTCCGTTCCTTCTGCTCTGTTTTTTCTTATGATGGTGTGTGTTGTCAAAT
GATGCAAAGGTTTAGGAATCGTTTGAGAGATAAATATACATAATGTTACG
GATGTAATTTTTTTTTCCCCCTCTTTC
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