FC925401

Overview
NameFC925401
Unique NameFC925401
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length527
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HS71L_HUMAN (Heat shock 70 kDa protein 1-like OS=Homo sapiens GN=HSPA1L PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 7.270e-20
Identity = 45/87 (51.72%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   ++K+ AKN LE+YA++M++ V D+ + GK++ +DK KI    +E + WL+ NQLAE DEF+ K KELE +CNPII K+YQ
Sbjct:  528 KAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKNKILDKCNELLSWLEVNQLAEKDEFDHKRKELEQMCNPIITKLYQ 614          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 9.495e-20
Identity = 45/87 (51.72%), Postives = 62/87 (71.26%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            +AED      ++AKN LENYA+SM+NT+ D  VAGKL  ADK  +  AV+E + WL+ NQ A ++E+  + KELEG+C PI++KMYQ
Sbjct:  529 EAEDKAHVXXIDAKNGLENYAFSMKNTINDPNVAGKLDDADKNAVTTAVEEALRWLNDNQEASLEEYNHRQKELEGVCAPILSKMYQ 615          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP71_ORYLA (Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.495e-20
Identity = 41/87 (47.13%), Postives = 66/87 (75.86%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED Q + K+ AKN LE+ A++++++ +DD +  K++  D++++ +  DET+ WL+ NQLA+ DEF+ K KELE +CNPII+K+YQ
Sbjct:  528 KAEDEQQRDKIAAKNSLESLAFNLKSSAQDDSLKDKISQEDRKRVVEKCDETIAWLENNQLADKDEFQHKQKELEKVCNPIISKLYQ 614          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.495e-20
Identity = 45/87 (51.72%), Postives = 62/87 (71.26%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   + +V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII  +YQ
Sbjct:  526 KAEDEVQRDRVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIITGLYQ 612          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 9.495e-20
Identity = 45/87 (51.72%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   +++V AKN LE+YA++M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+ +YQ
Sbjct:  526 KAEDEIQRERVGAKNALESYAFNMKSVVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 612          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.240e-19
Identity = 45/87 (51.72%), Postives = 63/87 (72.41%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   +++V AKN LE+YA +M++ V+D+ + GK++ ADK+K+     E + WLD N LAE DEFE K KELE +CNPII+ +YQ
Sbjct:  523 KAEDEVQRERVSAKNALESYALNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ 609          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.240e-19
Identity = 41/87 (47.13%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            K ED + ++ VE+++KLENY YSM+NT+ +D+V  KL A +       + + ++W++ NQLAE DE+EDKLK +EG+CNP++ K+YQ
Sbjct:  527 KEEDEKRRRCVESRHKLENYCYSMKNTLSEDQVKQKLGADEVDSALSTITDALKWVEANQLAEHDEYEDKLKHVEGVCNPLVTKLYQ 613          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4)

HSP 1 Score: 95.9005 bits (237), Expect = 1.240e-19
Identity = 44/87 (50.57%), Postives = 64/87 (73.56%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   ++K+ AKN LE+YA++M++ V D+ +  K++ +DK+KI    +E + WL+ NQLAE DEF+ K KELE +CNPII K+YQ
Sbjct:  528 KAEDEGQREKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCNEVLSWLEANQLAEKDEFDHKRKELENMCNPIITKLYQ 614          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.620e-19
Identity = 44/87 (50.57%), Postives = 66/87 (75.86%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            K ED ++ KK+EAKN LENYAY++RNTV+D+K+  K+   DK+ IE+ V E +E+++ N+  E +E+E+K KEL+   NPII+K+YQ
Sbjct:  532 KTEDEKLDKKLEAKNSLENYAYNIRNTVRDEKLKEKIQEEDKKSIEEKVKEVLEFIETNEDLEKEEYEEKEKELKNFANPIISKLYQ 618          
BLAST of FC925401 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.620e-19
Identity = 45/87 (51.72%), Postives = 62/87 (71.26%), Query Frame = 2
Query:    2 KAEDFQVKKKVEAKNKLENYAYSMRNTVKDDKVAGKLAAADKQKIEKAVDETVEWLDGNQLAEVDEFEDKLKELEGLCNPIIAKMYQ 262
            KAED   + +V AKN LE+Y Y+M+ TV+D+K+ GK++  DKQK+     E +  LD NQ+AE +E+E K KELE LCNPI+ K+YQ
Sbjct:  529 KAEDEANRDRVGAKNSLESYTYNMKQTVEDEKLKGKISDQDKQKVLDKCQEVISSLDRNQMAEKEEYEHKQKELEKLCNPIVTKLYQ 615          
The following BLAST results are available for this feature:
BLAST of FC925401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 160
Match NameE-valueIdentityDescription
HS71L_HUMAN7.270e-2051.72Heat shock 70 kDa protein 1-like OS=Homo sapiens G... [more]
HSP74_TRYBB9.495e-2051.72Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP71_ORYLA9.495e-2047.13Heat shock 70 kDa protein 1 OS=Oryzias latipes PE=... [more]
HSP71_CANFA9.495e-2051.72Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HS71A_PIG9.495e-2051.72Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
HSP71_CERAE1.240e-1951.72Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP70_THEAN1.240e-1947.13Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HS71L_MOUSE1.240e-1950.57Heat shock 70 kDa protein 1-like OS=Mus musculus G... [more]
HSP70_PYRSA1.620e-1950.57Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_CHICK1.620e-1951.72Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YH12FM1 TF Citrus clementina cDNA clone KN0AAP3YH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925401 ID=FC925401; Name=FC925401; organism=Citrus clementina; type=EST; length=527bp
CAAGGCTGAAGACTTTCAAGTGAAGAAGAAGGTGGAGGCGAAGAACAAGT
TAGAGAATTACGCGTACAGTATGAGGAATACAGTGAAGGATGACAAGGTT
GCAGGAAAATTGGCCGCAGCAGACAAGCAAAAGATTGAGAAGGCAGTTGA
TGAGACTGTCGAGTGGCTTGACGGGAATCAACTGGCTGAAGTTGATGAGT
TCGAGGACAAGTTGAAGGAGTTGGAGGGCTTGTGCAATCCCATAATAGCA
AAGATGTATCAAGGTGACGGTGGGGATGTTCCAATGGGTGGCGGCTATGG
CTCCTCCGGGTCTGGTGGTTCTGGTGCCGGTGCTGGGCCTAAGATTGAGG
AAGTTGATTGAAGTTAAAACGTTGTCGCTAGGGAAGTCCTTCCTGCTATG
TTCCGTTCCTTCTGCTCTGTTTTTTCTTATGATGGTGTGTGTTGTCAAAT
GATGCAAAGGTTTAGGAATCGTTTGAGAGATAAATATACATAATGTTACG
GATGTAATTTTTTTTTCCCCCTCTTTC
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