FC925412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH_CHLVU (Cell division protease ftsH homolog OS=Chlorella vulgaris GN=ftsH PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.229e-12 Identity = 34/69 (49.28%), Postives = 48/69 (69.57%), Query Frame = 2 Query: 272 NDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSR 478 N+++ ++QLL E+DG G +GV++ ATNRP+VLD ALLRPGRFD+ V V P RV+IL + + Sbjct: 1148 NEKQVSLLSQLLIELDGIQGRNGVVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQKKRVEILQFYGQ 1216 HSP 2 Score: 71.2478 bits (173), Expect = 2.737e-12 Identity = 37/73 (50.68%), Postives = 50/73 (68.49%), Query Frame = 2 Query: 20 IPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 238 +P G LL GPPGTGKTLL +A+AGEA VP + S +E A +++ +F++A+ APCIVFIDEID + Sbjct: 1006 LPHGILLTGPPGTGKTLLVQALAGEAQVPVIVLSGSSLMEPGES-AAFKLQLVFQEARQLAPCIVFIDEIDTL 1077
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FIGN_MOUSE (Fidgetin OS=Mus musculus GN=Fign PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.229e-12 Identity = 44/149 (29.53%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 20 IPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID-AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKIL 463 +P+ LL GP GTGKTLL R +A + G FF A S V ++G + F A+ + P ++F+ +ID + + R + + QL T + S ++V+ AT++P+ +D +L R F +++ + PD R +I+ Sbjct: 518 LPRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWIGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVSEEHSPVSRMRTEFLMQLDTVLT--SAEDQIVVICATSKPEEIDESLRR--YFMKRLLIPLPDSTARHQII 662
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: YCF46_PORPU (Uncharacterized AAA domain-containing protein ycf46 OS=Porphyra purpurea GN=ycf46 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.605e-12 Identity = 48/150 (32.00%), Postives = 70/150 (46.67%), Query Frame = 2 Query: 23 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVH 472 PKG LLVG GTGK+L A+A+A + +P + VG SR+R++ A+ +PC+++IDEID R +T + + V V+A N L S +LR GRFD +D P+ R I +H Sbjct: 259 PKGLLLVGIQGTGKSLTAKAIANDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEIDKAFSNLYSQGDSGTSAR--VFGTFITWLS--EKTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNNEERELIFQIH 404
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: KATL2_XENLA (Katanin p60 ATPase-containing subunit A-like 2 OS=Xenopus laevis GN=katnal2 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 2.096e-12 Identity = 37/71 (52.11%), Postives = 47/71 (66.20%), Query Frame = 2 Query: 26 KGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 238 KG LL GPPGTGKTLLA+AVA E FF+ +AS V + G VR LFE A+ AP +F+DE+++V Sbjct: 292 KGLLLYGPPGTGKTLLAKAVATECNTTFFNISASTIVSKWRGDSEKLVRVLFELARYHAPSTIFLDELESV 362
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FIGN_HUMAN (Fidgetin OS=Homo sapiens GN=FIGN PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 2.096e-12 Identity = 44/149 (29.53%), Postives = 76/149 (51.01%), Query Frame = 2 Query: 20 IPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID-AVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKIL 463 +P+ LL GP GTGKTLL R +A + G FF A S V ++G + F A+ + P ++F+ +ID + + R + + QL T + S ++V+ AT++P+ +D +L R F +++ + PD R +I+ Sbjct: 518 LPRSILLFGPRGTGKTLLGRCIASQLGATFFKIAGSGLVAKWLGEAEKIIHASFLVARCRQPSVIFVSDIDMLLSSQVNEEHSPVSRMRTEFLMQLDTVLT--SAEDQIVVICATSKPEEIDESLRR--YFMKRLLIPLPDSTARHQII 662 The following BLAST results are available for this feature:
BLAST of FC925412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925412 ID=FC925412; Name=FC925412; organism=Citrus clementina; type=EST; length=491bpback to top |