FC925412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH7_ARATH (Cell division protease ftsH homolog 7, chloroplastic OS=Arabidopsis thaliana GN=FTSH7 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 5.451e-53 Identity = 111/162 (68.52%), Postives = 123/162 (75.93%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGKAL 490 L ++ P+G LLVG PGTGKTLLA+AVAGEA VPF SC+ASEFVEL+VG+GASRVRDLF +AK +AP I+FIDEIDAV NDEREQT+NQLLTEMDGF NS VIVL ATNR DVLD AL RPGRFDR VTV+ PD GR IL VH K L Sbjct: 353 LGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGSNDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGRESILRVHVSKKEL 514
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: RCA1_SCHPO (Mitochondrial respiratory chain complexes assembly protein rca1 OS=Schizosaccharomyces pombe GN=SPBC543.09 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.214e-52 Identity = 100/156 (64.10%), Postives = 119/156 (76.28%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVH 472 L +KIP+G +L GPPGTGKTLLA+A AGEA VPF S + SEF+E+FVGVG SRVRDLF A+ APCI+FIDEIDA+ NDERE T+NQLL EMDGF+ + ++V A TNRPDVLD ALLRPGRFDRQ+T+DRPD+ GR +I VH Sbjct: 324 LGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVH 479
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH8_ORYSJ (Cell division protease ftsH homolog 8, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH8 PE=3 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 1.214e-52 Identity = 100/156 (64.10%), Postives = 123/156 (78.85%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVH 472 L +KIPKG LLVGPPGTGKTLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF++A+ AP I+FIDEIDA+ NDERE T+NQLL EMDGF SGV+VLA TNRPD+LD ALLRPGRFDRQ+T+D+PD+ GR +I ++ Sbjct: 363 LGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIY 518
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH9_ARATH (Cell division protease ftsH homolog 9, chloroplastic OS=Arabidopsis thaliana GN=FTSH9 PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 3.533e-52 Identity = 109/162 (67.28%), Postives = 123/162 (75.93%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGKAL 490 L ++ P+G LLVG PGTGKTLLA+AVAGE+ VPF SC+ASEFVEL+VG+GASRVRDLF +AK +AP I+FIDEIDAV NDEREQT+NQLLTEMDGF +S VIVL ATNR DVLD AL RPGRFDR VTV+ PD GR IL VH K L Sbjct: 357 LGARPPRGVLLVGLPGTGKTLLAKAVAGESDVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSNDEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRESILKVHVSKKEL 518
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSHA_ARATH (Cell division protease ftsH homolog 10, mitochondrial OS=Arabidopsis thaliana GN=FTSH10 PE=1 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 1.343e-51 Identity = 98/156 (62.82%), Postives = 122/156 (78.21%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVH 472 L +KIPKG LLVGPPGTGKTLLA+A AGE+ VPF S + S+F+E+FVGVG SRVR+LF++A+ AP I+FIDEIDA+ NDERE T+NQLL EMDGF +GV+VLA TNRPD+LD ALLRPGRFDRQ+T+D+PD+ GR +I ++ Sbjct: 355 LGAKIPKGALLVGPPGTGKTLLAKATAGESAVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCAPSIIFIDEIDAIGRARGRGGFSGGNDERESTLNQLLVEMDGFGTTAGVVVLAGTNRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFQIY 510
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH3_ORYSJ (Cell division protease ftsH homolog 3, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH3 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 2.290e-51 Identity = 98/156 (62.82%), Postives = 123/156 (78.85%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVH 472 L +KIPKG LLVGPPGTGKTLLA+A AGE+GVPF S + S+F+E+FVGVG SRVR+LF++A+ +P IVFIDEIDA+ +DERE T+NQLL EMDGF SGV+VLA TNRPD+LD ALLRPGRFDRQ+++D+PD+ GR +I ++ Sbjct: 348 LGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQEARQCSPSIVFIDEIDAIGRARGRGGFSGGHDERESTLNQLLVEMDGFGTTSGVVVLAGTNRPDILDKALLRPGRFDRQISIDKPDIKGRDQIFRIY 503
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: AFG3_YEAST (Mitochondrial respiratory chain complexes assembly protein AFG3 OS=Saccharomyces cerevisiae GN=AFG3 PE=1 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 3.907e-51 Identity = 102/159 (64.15%), Postives = 121/159 (76.10%), Query Frame = 2 Query: 2 TALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV--XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVH 472 T L +KIP+G +L GPPGTGKTLLA+A AGEA VPF S + SEFVE+FVGVGASRVRDLF +A+S AP I+FIDEIDA+ NDERE T+NQLL EMDGF+ + V+VLA TNRPDVLD+AL+RPGRFDR + +D PDV GR +I VH Sbjct: 314 TKLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGALGGANDEREATLNQLLVEMDGFTTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDSPDVNGRQQIYLVH 472
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH7_ORYSJ (Cell division protease ftsH homolog 7, chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH7 PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 5.102e-51 Identity = 108/162 (66.67%), Postives = 122/162 (75.31%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGKAL 490 L ++ P+G LLVG PGTGKTLLA+AVAGEA VPF SC+ASEFVEL+VG+GA+RVRDLF +AK ++P I+FIDEIDAV NDEREQT+NQLLTEMDGF NS VIVL ATNR DVLD AL RPGRFDR V V+ PD GR IL VH K L Sbjct: 374 LGARPPRGVLLVGLPGTGKTLLAKAVAGEAEVPFISCSASEFVELYVGMGAARVRDLFARAKKESPSIIFIDEIDAVAKSRDGRYRIVSNDEREQTLNQLLTEMDGFDTNSAVIVLGATNRADVLDPALRRPGRFDRVVMVEAPDRFGRESILKVHVSRKEL 535
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 8.703e-51 Identity = 97/162 (59.88%), Postives = 123/162 (75.93%), Query Frame = 2 Query: 5 ALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGKAL 490 A ++ PKG LL GPPGTGKTLLA+A AGEA VPFF +AS FVEL+VG+GA RVR++F++A+ AP I+FIDE+DAV NDEREQT+NQ+L EMDG + N+G++++ ATNR DVLD ALLRPGRFDR +TV PD+ R +IL +HS+GK L Sbjct: 239 AAGARFPKGILLGGPPGTGKTLLAKATAGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIGGGNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKEREEILKLHSKGKRL 400
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: AFG32_MOUSE (AFG3-like protein 2 OS=Mus musculus GN=Afg3l2 PE=1 SV=1) HSP 1 Score: 196.823 bits (499), Expect = 4.319e-50 Identity = 95/157 (60.51%), Postives = 115/157 (73.25%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSR 478 L +KIPKG +L GPPGTGKTLLA+A AGEA VPF + + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV E+E T+NQLL EMDGF+ + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+ GR I VH R Sbjct: 335 LGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLR 491 The following BLAST results are available for this feature:
BLAST of FC925412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925412 ID=FC925412; Name=FC925412; organism=Citrus clementina; type=EST; length=491bpback to top |