FC925412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2) HSP 1 Score: 196.823 bits (499), Expect = 4.319e-50 Identity = 95/157 (60.51%), Postives = 115/157 (73.25%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSR 478 L +KIPKG +L GPPGTGKTLLA+A AGEA VPF + + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV E+E T+NQLL EMDGF+ + V++LA TNRPD+LD ALLRPGRFDRQ+ + PD+ GR I VH R Sbjct: 336 LGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLR 492
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH5_ORYSJ (Cell division protease ftsH homolog 5, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH5 PE=3 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 7.368e-50 Identity = 97/157 (61.78%), Postives = 116/157 (73.89%), Query Frame = 2 Query: 2 TALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVH 472 T L K+PKG LLVGPPGTGKT+LARA+AGEAGVPFFSC+ SEF E+FVGVGA RVRDLF AK ++PCI+F+DEIDA+ + T+NQLL E+DGF N G+IV+AATN P+ LD AL+RPGRFDR + V PDV GR +IL H Sbjct: 256 TRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAI---GGSRNPKDQQYMKMTLNQLLVELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESH 409
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 7.368e-50 Identity = 94/157 (59.87%), Postives = 115/157 (73.25%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSR 478 L +KIPKG +L GPPGTGKTLLA+A AGEA VPF + + SEF+E+FVGVG +RVRDLF A+ APCI+FIDEIDAV E+E T+NQLL EMDGF+ + V++LA TNRPD+LD AL+RPGRFDRQ+ + PD+ GR I VH R Sbjct: 337 LGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLR 493
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: RCA1_YEAST (Mitochondrial respiratory chain complexes assembly protein RCA1 OS=Saccharomyces cerevisiae GN=RCA1 PE=1 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 1.257e-49 Identity = 96/154 (62.34%), Postives = 117/154 (75.97%), Query Frame = 2 Query: 14 SKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVH 472 +KIP+G +L GPPGTGKTLLA+A AGEAGVPF+ + SEFVE+FVGVGA+RVRDLF+ A+ AP IVFIDEIDA+ NDERE T+NQ+L EMDGF+ V+VLA TNRPD+LD ALLRPGRFDR + +D+P++ GR I VH Sbjct: 378 AKIPRGAILSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNFSGANDERENTLNQMLVEMDGFTPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKPELEGRKAIFAVH 531
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH4_ORYSJ (Cell division protease ftsH homolog 4, mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH4 PE=3 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 1.641e-49 Identity = 98/157 (62.42%), Postives = 114/157 (72.61%), Query Frame = 2 Query: 2 TALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVH 472 T L K+PKG LLVGPPGTGKT+LARAVAGEAGVPFFSC+ SEF E+FVGVGA RVRDLF AK ++PCI+F+DEIDA+ T+NQLL E+DGF N G+IV+AATN P LD AL+RPGRFDR + V PDV GR +IL H Sbjct: 249 THLGGKLPKGVLLVGPPGTGKTMLARAVAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAI---GGSRNPKDQQYMRMTLNQLLVELDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVEGRRQILESH 402
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: YMEL1_MOUSE (ATP-dependent metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 2.144e-49 Identity = 98/154 (63.64%), Postives = 117/154 (75.97%), Query Frame = 2 Query: 2 TALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKIL 463 T L K+PKG LLVGPPGTGKTLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK+ APC++FIDE+D+V + QTINQLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR +IL Sbjct: 307 TVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEIL 458
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH4_ARATH (Cell division protease ftsH homolog 4, mitochondrial OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2) HSP 1 Score: 194.512 bits (493), Expect = 2.144e-49 Identity = 97/157 (61.78%), Postives = 115/157 (73.25%), Query Frame = 2 Query: 2 TALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVH 472 T L K+PKG LLVGPPGTGKT+LARA+AGEAGVPFFSC+ SEF E+FVGVGA RVRDLF AK +PCI+FIDEIDA+ + T+NQ+L E+DGF N G+IV+AATN P+ LD AL+RPGRFDR + V PDV GR +IL H Sbjct: 253 TRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEMFVGVGARRVRDLFSAAKKCSPCIIFIDEIDAI---GGSRNPKDQQYMKMTLNQMLVELDGFKQNEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESH 406
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: YMEL1_HUMAN (ATP-dependent metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1 PE=1 SV=2) HSP 1 Score: 194.126 bits (492), Expect = 2.800e-49 Identity = 98/154 (63.64%), Postives = 117/154 (75.97%), Query Frame = 2 Query: 2 TALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKIL 463 T L K+PKG LLVGPPGTGKTLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK+ APC++FIDE+D+V + QTINQLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR +IL Sbjct: 365 TILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEIL 516
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSHB_ARATH (Cell division protease ftsH homolog 11, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=FTSH11 PE=1 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 3.657e-49 Identity = 99/163 (60.74%), Postives = 118/163 (72.39%), Query Frame = 2 Query: 2 TALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGKAL 490 T L K+PKG LL G PGTGKTLLA+A+AGEAGVPFF A SEF E+FVGVGA RVR LF+ AK KAPCI+FIDEIDAV ++T++QLL EMDGF N G+IV+AATN PD+LD AL RPGRFDR + V PDV GR +IL ++ +GK + Sbjct: 388 TRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAV----GSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPM 546
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: YME1_CAEEL (Protein YME1 homolog OS=Caenorhabditis elegans GN=ymel-1 PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 4.776e-49 Identity = 104/164 (63.41%), Postives = 122/164 (74.39%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILH------VHSRG 481 L ++PKG LLVGPPGTGKTLLARA+AGEA VPFF A SEF E+ VG GA RVRDLF+KAK++APCI+FIDEID+V + QTINQLL+EMDGF+ N G+IV+AATNR D LD ALLRPGRFD +VTV +PD+AGRV I + VHS G Sbjct: 229 LGGRLPKGVLLVGPPGTGKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSV--GSKRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLAGRVDIFNFYLSKIVHSGG 390 The following BLAST results are available for this feature:
BLAST of FC925412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925412 ID=FC925412; Name=FC925412; organism=Citrus clementina; type=EST; length=491bpback to top |