FC925412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: AFG31_MOUSE (AFG3-like protein 1 OS=Mus musculus GN=Afg3l1 PE=2 SV=2) HSP 1 Score: 192.586 bits (488), Expect = 8.146e-49 Identity = 92/157 (58.60%), Postives = 114/157 (72.61%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSR 478 L +KIPKG +L GPPGTGKTLLA+A AGEA VPF + SEF+E+FVGVG +RVRD+F A+ APCI+FIDEIDA+ E+E T+NQ+L EMDGF+ ++ V+VLA TNRPD+LD AL RPGRFDRQ+ + PD+ GR I VH R Sbjct: 328 LGAKIPKGAMLTGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPDIKGRSSIFKVHLR 484
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH9_ORYSJ (Cell division protease ftsH homolog 9, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=FTSH9 PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.815e-48 Identity = 99/161 (61.49%), Postives = 116/161 (72.05%), Query Frame = 2 Query: 2 TALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGK 484 T L K+PKG LL G PGTGKTLLA+A+AGEAGVPFF A SEF E+FVGVGA RVR LF+ AK KAPCIVFIDEIDAV ++T++QLL EMDGF N G+IV+AATN PD+LD AL RPGRFDR + V PDV GR +IL ++ + K Sbjct: 354 TRLGGKLPKGILLTGSPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIVFIDEIDAV----GSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIIVMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDK 510
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: YMEL1_RAT (ATP-dependent metalloprotease YME1L1 OS=Rattus norvegicus GN=Yme1l1 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.370e-48 Identity = 97/154 (62.99%), Postives = 116/154 (75.32%), Query Frame = 2 Query: 2 TALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKIL 463 T L K+PKG LLVGPPGTGKTLLARAVAGEA VPF+ + SEF E+FVGVGASR+R+LF +AK+ APC++FIDE+D+V + QTI QLL EMDGF N GVI++ ATN P+ LD+AL+RPGRFD QVTV RPDV GR +IL Sbjct: 307 TVLGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSV--GGKRIEFPMHPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEIL 458
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 2.370e-48 Identity = 95/159 (59.75%), Postives = 115/159 (72.33%), Query Frame = 2 Query: 14 SKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGKAL 490 ++ P+G +L GPPGTGKTLLA+AVAGEAGVPFF S F ++ VGVGA RVRDLF KAK APCI+FIDEID+V EQT+NQLL EMDGF+ +GV+V+AATNR DVLD ALLRPGRFDR + ++ PD+ R IL VH++ K L Sbjct: 258 ARSPRGVILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNL 416
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: FTSH_MYCGE (Cell division protease ftsH homolog OS=Mycoplasma genitalium GN=ftsH PE=3 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 5.280e-48 Identity = 95/159 (59.75%), Postives = 114/159 (71.70%), Query Frame = 2 Query: 14 SKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGKAL 490 ++ P+G +L GPPGTGKTLLA+AVAGEAGVPFF S F ++ VGVGA RVRDLF KAK APCI+FIDEID+V EQT+NQLL EMDGF+ +GV+V+AATNR DVLD ALLRPGRFDR + ++ PD+ R IL VH+ K L Sbjct: 261 ARSPRGVILYGPPGTGKTLLAKAVAGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSYSVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILKVHAENKNL 419
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: YME1_YEAST (Protein YME1 OS=Saccharomyces cerevisiae GN=YME1 PE=1 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.438e-45 Identity = 92/158 (58.23%), Postives = 113/158 (71.52%), Query Frame = 2 Query: 5 ALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSR 478 +L K+PKG LL GPPGTGKTLLARA AGEAGV FF + SEF E++VGVGA R+RDLF +A+S+AP I+FIDE+DA+ +QT+NQLL E+DGFS SG+I++ ATN P+ LD AL RPGRFD+ V VD PDV GR IL H + Sbjct: 308 SLGGKLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQAY---AKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVRGRADILKHHMK 462
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: SPG7_MOUSE (Paraplegin OS=Mus musculus GN=Spg7 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.998e-43 Identity = 92/162 (56.79%), Postives = 114/162 (70.37%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGKAL 490 L +K+PKG LL+GPPG GKTLLA+AVA EA VPF + A EFVE+ G+GA+RVR LF++A+++APCIV+IDEIDAV N E EQT+NQLL EMDG VIVLA+TNR DVLD+AL+RPGR DR V +D P + R +I H +G L Sbjct: 337 LGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKL 498
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: SPG7_RAT (Paraplegin OS=Rattus norvegicus GN=Spg7 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 5.114e-43 Identity = 92/162 (56.79%), Postives = 114/162 (70.37%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGKAL 490 L +K+PKG LL+GPPG GKTLLA+AVA EA VPF + A EFVE+ G+GA+RVR LF++A+++APCIV+IDEIDAV N E EQT+NQLL EMDG VIVLA+TNR DVLD+AL+RPGR DR V +D P + R +I H +G L Sbjct: 337 LGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTSMSGFSNTEEEQTLNQLLVEMDGMGTADHVIVLASTNRADVLDNALMRPGRLDRHVFIDLPTLQERREIFEQHLKGLKL 498
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: SPG7_HUMAN (Paraplegin OS=Homo sapiens GN=SPG7 PE=1 SV=2) HSP 1 Score: 171.014 bits (432), Expect = 2.538e-42 Identity = 90/162 (55.56%), Postives = 112/162 (69.14%), Query Frame = 2 Query: 8 LPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-XXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGKAL 490 L +K+PKG LL+GPPG GKTLLA+AVA EA VPF + A EFVE+ G+GA+RVR LF++A+++APCIV+IDEIDAV N E EQT+NQLL EMDG VIVLA+TNR D+LD AL+RPGR DR V +D P + R +I H + L Sbjct: 337 LGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLPTLQERREIFEQHLKSLKL 498
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: YME1_SCHMA (Protein YME1 homolog OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.149e-41 Identity = 86/153 (56.21%), Postives = 107/153 (69.93%), Query Frame = 2 Query: 14 SKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVH 472 +K+PKG LLVGPPG GKTLLA+AV+GEA VPF + S F E+ VG+GASR+R LF AK +PC+VFIDEID+V + QTINQLL EMDGF G+IVL ATN+ +VLD ALLRPGRFD Q+ V P GR+ +L+++ Sbjct: 196 AKLPKGVLLVGPPGVGKTLLAKAVSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSV--GGNRTFSPHHPFANQTINQLLAEMDGFQSKEGIIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYEGRIALLNLY 346 The following BLAST results are available for this feature:
BLAST of FC925412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925412 ID=FC925412; Name=FC925412; organism=Citrus clementina; type=EST; length=491bpback to top |