FC925412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: YME1_SCHPO (Protein YME1 homolog OS=Schizosaccharomyces pombe GN=SPCC965.04c PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 4.787e-41 Identity = 88/163 (53.99%), Postives = 110/163 (67.48%), Query Frame = 2 Query: 2 TALPSKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSG----VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSR 478 T L K+P+G LL GPPGTGKT+LARAVAGEA VPFF + S+F E++VGVGA RVR+LF A+ +AP I+FIDE+DA+ QT+NQLL ++DGFS N V+ + ATN P+ LD AL RPGRFDR + V PDV GR+ IL H+R Sbjct: 293 TRLGGKLPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKRNARDAA---HMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTR 452
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.393e-40 Identity = 82/151 (54.30%), Postives = 103/151 (68.21%), Query Frame = 2 Query: 23 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHS 475 PKG LL GPPGTGKTLLA+AVA E F SE V+ F+G GA VRD+F+ AK K+PCI+FIDEIDAV + E ++T+ QLL EMDGF V ++AATNRPD+LD A+LRPGRFDR + + PD GR++IL +H+ Sbjct: 182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHT 332
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 1.393e-40 Identity = 82/151 (54.30%), Postives = 103/151 (68.21%), Query Frame = 2 Query: 23 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHS 475 PKG LL GPPGTGKTLLA+AVA E F SE V+ F+G GA VRD+F+ AK K+PCI+FIDEIDAV + E ++T+ QLL EMDGF V ++AATNRPD+LD A+LRPGRFDR + + PD GR++IL +H+ Sbjct: 182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLEILKIHT 332
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.376e-40 Identity = 82/151 (54.30%), Postives = 102/151 (67.55%), Query Frame = 2 Query: 23 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHS 475 PKG LL GPPGTGKTLLA+AVA E F SE V+ F+G GA VRD+F+ AK K+PCI+FIDEIDAV + E ++T+ QLL EMDGF V ++AATNRPD+LD A+LRPGRFDR + + PD GR+ IL +H+ Sbjct: 182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHT 332
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.376e-40 Identity = 82/151 (54.30%), Postives = 102/151 (67.55%), Query Frame = 2 Query: 23 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHS 475 PKG LL GPPGTGKTLLA+AVA E F SE V+ F+G GA VRD+F+ AK K+PCI+FIDEIDAV + E ++T+ QLL EMDGF V ++AATNRPD+LD A+LRPGRFDR + + PD GR+ IL +H+ Sbjct: 182 PKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEISMPDEDGRLDILKIHT 332
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 2.376e-40 Identity = 82/152 (53.95%), Postives = 103/152 (67.76%), Query Frame = 2 Query: 23 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSR 478 PKG LL GPPGTGKTLLA+AVA E F SE V+ F+G GAS V+D+F+ AK KAP I+FIDEIDA+ + E ++T+ QLL EMDGF V ++ ATNRPD+LD A+LRPGRFDR + V PD GR++IL +H+R Sbjct: 204 PKGILLYGPPGTGKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTR 355
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: PSMR_METVS (Proteasome-activating nucleotidase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 5.292e-40 Identity = 81/151 (53.64%), Postives = 102/151 (67.55%), Query Frame = 2 Query: 23 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHS 475 PKG LL GPPGTGKTLLA+AVA E F SE V+ F+G GA VRD+F+ AK K+PCI+FIDEIDAV + E ++T+ QLL EMDGF V ++AATNRPD+LD A+LRPGRFDR + + PD GR++I +H+ Sbjct: 182 PKGVLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPDILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHT 332
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: PSMR_METTH (Proteasome-activating nucleotidase OS=Methanobacterium thermoautotrophicum GN=pan PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 5.292e-40 Identity = 85/156 (54.49%), Postives = 104/156 (66.67%), Query Frame = 2 Query: 23 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRGKAL 490 PKG LL GPPGTGKTLLA+AVA E F ASEFV ++G GA VR +FE AK K+P I+FIDEIDAV + E ++T+ QLL E+DGF V ++AATNRPD+LD ALLRPGRFDR + V P+ GR +IL +H+ G AL Sbjct: 185 PKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPDILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMAL 340
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.627e-39 Identity = 82/152 (53.95%), Postives = 101/152 (66.45%), Query Frame = 2 Query: 23 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSR 478 PKG LL GPPGTGKTLLA+AVA A F AA E V+ F+G GA VR+LFE A+ KAP I+FIDEIDA+ + E ++T+ QLL EMDGF + V+AATNR D+LD ALLRPGRFDR + + PD GR +I +H+R Sbjct: 213 PKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTR 364
BLAST of FC925412 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 3.430e-39 Identity = 82/153 (53.59%), Postives = 101/153 (66.01%), Query Frame = 2 Query: 23 PKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVXXXXXXXXXXXNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILHVHSRG 481 PKG LL GPPGTGKTLLARAVA + F SE V+ ++G GA VR+LFE AK K+P I+FIDEIDA+ + E +T+ QLL EMDGFS V ++ ATNR D+LD ALLRPGRFDR + + PD+ GRV IL++H G Sbjct: 187 PKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAG 339 The following BLAST results are available for this feature:
BLAST of FC925412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 385
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925412 ID=FC925412; Name=FC925412; organism=Citrus clementina; type=EST; length=491bpback to top |