FC925420
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_METHJ (Elongation factor 1-alpha OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=tuf PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.065e-58 Identity = 109/201 (54.23%), Postives = 142/201 (70.65%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNM 684 M EK HIN+ VIGH+D GKSTT G L+Y+ G + +IE+++KEA K SF +AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD AV+++ + G E QT+EH L+ TLG+KQ+I NKMDA Y +AR++++ +V + LK VG NP+ V F+PIS FEGDN+ Sbjct: 1 MATEKPHINLAVIGHIDHGKSTTVGRLMYEAGAVPAHIIEQYKKEAESKGKGSFAFAWVMDNLKEERERGITIDIAHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAVIVVAAPDGVME-------QTKEHVFLSKTLGIKQLIVAVNKMDAA--NYDEARFNQVKSDVGALLKMVGTNPDTVKFIPISAFEGDNI 192
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_SULTO (Elongation factor 1-alpha OS=Sulfolobus tokodaii GN=tuf PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.545e-57 Identity = 101/201 (50.25%), Postives = 146/201 (72.64%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIER 693 +K H+N++VIGHVD GKST G L+ G +D++ I+ E+ A ++ K S KYA++LD+LK ERERG+TI++ +FET K++ T+IDAPGHRDF+KNMITG SQAD A+L++ + G +EAG+S +GQTREH +LA T+G+ Q+I NKMD T P Y + R+ EIV +V ++K G++ KV FVP+ G+N+ +R Sbjct: 3 QKPHLNLIVIGHVDHGKSTLVGRLLMDRGFLDEKTIKEAEEAAKKLGKESEKYAFLLDRLKEERERGVTINLTFMRFETKKFFFTIIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSAEGQTREHIILAKTMGINQVIVAVNKMDLTDPPYDEKRFKEIVDQVGKFMKSFGFDMNKVKFVPVVAPTGENITQR 203
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_THEVO (Elongation factor 1-alpha OS=Thermoplasma volcanium GN=tuf PE=3 SV=2) HSP 1 Score: 219.935 bits (559), Expect = 1.001e-56 Identity = 107/201 (53.23%), Postives = 144/201 (71.64%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNM 684 M +K H+N++ IGHVD GKST G L+++ G I +IE + KEA + K +F++AWV+D+ K ERERG+TID+A KFET KYY T+IDAPGHRDF+KNMITGTSQAD A+L+I + G G+ + QTREHA LA TLGV Q++ NKMDAT P +S+ R++E+ + LK +GY + FVPISG++GDN+ Sbjct: 1 MASQKPHLNLITIGHVDHGKSTLVGRLLFEHGEIPAHIIEEYRKEAEQKGKATFEFAWVMDRFKEERERGVTIDLAHRKFETDKYYFTLIDAPGHRDFVKNMITGTSQADAAILVISAREG---EGVME--QTREHAFLARTLGVPQIVVAINKMDATEPPFSEKRFNEVKADAEKLLKTIGY--KDATFVPISGYKGDNV 194
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_METMA (Elongation factor 1-alpha OS=Methanosarcina mazei GN=tuf PE=3 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.001e-56 Identity = 104/203 (51.23%), Postives = 142/203 (69.95%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIE 690 M +K H+N+ VIGH+D GKST G L+Y G + +IE++++EA + K SF +AWV+D LK ERERGITIDIA +F+T K+Y TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA YS+ARY E+V++VS LK +G+ P ++PF+P S F GDN+++ Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTFVGRLMYDAGAVPAHIIEKYKEEAKQKGKESFAFAWVMDSLKEERERGITIDIAHKRFDTDKFYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAV--DYSEARYKEVVEQVSGILKMIGFKPSEIPFIPTSAFHGDNIMK 194
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.308e-56 Identity = 106/204 (51.96%), Postives = 142/204 (69.61%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIER 693 M EK H+N+ VIGH+D GKSTT G L+++ G + +IE F KEA K SF++AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L++ + G E QT+EH L+ TLG+ Q+I NKMDA KY + RY+E+ +++S LK VGY P+ + F+P+S F GDN+ ++ Sbjct: 1 MAAEKPHMNLAVIGHIDHGKSTTVGRLLFETGTVPPHIIESFRKEAESKGKGSFEFAWVMDSLKEERERGITIDIAHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAALLVVAAPDGVME-------QTKEHVFLSRTLGINQLIIGINKMDAA--KYDEKRYNEVKEQLSQLLKMVGYKPDDISFIPMSAFVGDNIAKK 195
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_METAC (Elongation factor 1-alpha OS=Methanosarcina acetivorans GN=tuf PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.308e-56 Identity = 103/201 (51.24%), Postives = 141/201 (70.15%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNM 684 M +K H+N+ VIGH+D GKST G L+Y+ G + +IE++++EA + K SF +AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD A+L++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+A+Y E+V++VS LK +G+ P +PF+P S F GDN+ Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTLVGRLMYEAGAVPAHIIEKYKEEAKQKGKESFAFAWVMDSLKEERERGITIDIAHKRFDTPKYYFTVVDCPGHRDFVKNMITGASQADAAILVVAAPDGVM-------AQTKEHIFLSRTLGINQLIIAINKMDAV--EYSEAKYKEVVEQVSGLLKMIGFKPANIPFIPTSAFMGDNI 192
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_METBF (Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=tuf PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.708e-56 Identity = 106/202 (52.48%), Postives = 140/202 (69.31%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMI 687 M +K H+N+ VIGH+D GKST G L+Y G + VIE++++EA + K SF +AWV+D LK ERERGITIDIA +F+T KYY TV+D PGHRDF+KNMITG SQAD AVL++ + G QT+EH L+ TLG+ Q+I NKMDA +YS+ RY E+V++VS LK +G+ P +PFVP S F GDN++ Sbjct: 1 MAADKPHMNLAVIGHIDHGKSTFVGRLMYDAGAVPAHVIEKYKEEAKQKGKESFAFAWVMDSLKEERERGITIDIAHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDGVM-------AQTKEHIFLSRTLGINQLIVAINKMDAV--EYSEKRYKEVVEQVSGILKMIGFKPGDIPFVPTSAFYGDNVV 193
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.913e-56 Identity = 100/201 (49.75%), Postives = 145/201 (72.14%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIER 693 +K H+N++VIGHVD GKST G L+ G ID++ ++ E+ A ++ K S KYA+++D+LK ERERG+TI+++ +FET KY+ TVIDAPGHRDF+KNMITG SQAD A+L++ + G +EAG+S +GQTREH +L+ T+G+ Q+I NKMD Y + R+ EIV VS ++K G++ KV FVP+ +GDN+ + Sbjct: 3 QKPHLNLIVIGHVDHGKSTLIGRLLMDRGFIDEKTVKEAEEAAKKLGKDSEKYAFLMDRLKEERERGVTINLSFMRFETRKYFFTVIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSAEGQTREHIILSKTMGINQVIVAINKMDLADTPYDEKRFKEIVDTVSKFMKSFGFDMNKVKFVPVVAPDGDNVTHK 203
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_METS5 (Elongation factor 1-alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=tuf PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.805e-56 Identity = 99/201 (49.25%), Postives = 143/201 (71.14%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIER 693 +K H+N++VIGHVD GKST G L+ G +D++ I+ E+ A ++ K S KYA++LD+LK ERERG+TI++ +FET KY+ T+IDAPGHRDF+KNMITG SQAD A+L + + G FE+G+S +GQTREH +LA T+G+ Q+I KMD P Y + RY+EI + + ++K G++ KV F+PI G+N+ +R Sbjct: 3 QKPHLNLIVIGHVDHGKSTLVGRLLMDRGFLDEKTIKEAEEAAKKLGKESEKYAFLLDRLKEERERGVTINLTFMRFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILAVSARKGEFESGMSLEGQTREHIILAKTMGLNQVIVAITKMDVAEPPYDQKRYNEIKETIEKFMKSFGFDMSKVKFIPIVSITGENVTKR 203
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_CALMQ (Elongation factor 1-alpha OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=tuf PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.107e-55 Identity = 99/198 (50.00%), Postives = 137/198 (69.19%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNM 684 +K H+N+ +IGHVD GKST TG L+ + G +D++ E EA ++ K FKYAW++D+LK ERERG+TI+ FET KY+ T+ID PGHRDF+KNMI G SQAD A+L++ + G FE+G+ GQTREH LA+TLG++ +I NKMD Y + RY++I E+S LK + Y+ KVPF+P+S GDN+ Sbjct: 13 KKPHLNLAIIGHVDHGKSTLTGRLLLETGYVDEKAFAELEAEAKKLGKEDFKYAWIMDRLKEERERGVTIEAMHVGFETPKYFFTIIDLPGHRDFVKNMIVGASQADAALLVVSARPGEFESGVGPQGQTREHLFLAWTLGIRNLIVAVNKMDVV--NYDQKRYEQIKGELSKILKILRYDVNKVPFIPVSAVRGDNI 208 The following BLAST results are available for this feature:
BLAST of FC925420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925420 ID=FC925420; Name=FC925420; organism=Citrus clementina; type=EST; length=693bpback to top |