FC925420
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 7.192e-47 Identity = 93/198 (46.97%), Postives = 129/198 (65.15%), Query Frame = 1 Query: 91 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNM 684 + H N+ VIGHVD GKST G L+Y+ G + + VIE+ ++EA E K F++A+V+D L ERERG+TIDIA +F T +Y T++D PGHRDF+KNMITG SQAD AVL++ + G QTREH L+ TLG+ ++I NKMD Y +++Y+E+V V +VG+NP+ F+ S FEGDN+ Sbjct: 3 DNRHQNLAVIGHVDHGKSTMVGRLLYETGSVPEHVIEQHKEEAEEKGKGGFEFAYVMDNLAEERERGVTIDIAHQEFTTDEYEFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDG-------VAPQTREHVFLSRTLGIDELIVAVNKMDVV--DYDESKYNEVVSGVKDLFGQVGFNPDDAKFIATSAFEGDNV 191
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: HBS1_YEAST (Elongation factor 1 alpha-like protein OS=Saccharomyces cerevisiae GN=HBS1 PE=1 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 1.227e-46 Identity = 86/195 (44.10%), Postives = 130/195 (66.67%), Query Frame = 1 Query: 100 HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNM 684 H++ VV+GHVD+GKST G L+Y L +++ + + ++E+ M K SFK+AW++D+ ERERG+T+ I F T + T++DAPGHRDF+ N I G SQAD A+L +D +T FE+G DGQT+EH LLA +LG+ +I NKMD +S+ R++EI ++ YL +G+ + + +VPISGF G+ + Sbjct: 167 HLSFVVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERGVTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDCSTNAFESGFDLDGQTKEHMLLASSLGIHNLIIAMNKMD--NVDWSQQRFEEIKSKLLPYLVDIGFFEDNINWVPISGFSGEGV 359
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: ERF3_SCHPO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Schizosaccharomyces pombe GN=sup35 PE=1 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.602e-46 Identity = 90/202 (44.55%), Postives = 135/202 (66.83%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV-GYNPE-KVPFVPISGFEGDNMIER 693 K H+NIV IGHVD+GKST G++++ G +DKR +E+ E+EA E K S+ +W LD ERE+G T+++ FET +++DAPGH+ ++ NMI G SQAD VL+I + G FEAG + GQTREHA+LA T G+ ++ NKMD + ++S+ RY E V ++S +L++V GYN + V ++P+S + G N+ +R Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGINHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVSAYTGQNVKDR 437
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_NANEQ (Elongation factor 1-alpha OS=Nanoarchaeum equitans GN=tuf PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 4.662e-46 Identity = 95/205 (46.34%), Postives = 133/205 (64.88%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK-VPFVPISGFEGDNMIER 693 M +EK HIN+V IGHVD GKSTT G L Y LG I + +E+ +EA + K F +A+++D+ K ER RG+TIDIA + ET Y T++DAPGH+DF+KNMITG SQAD AVL++ + G E QT+EHA+LA T G+ Q+I NKMD Y + R++E+ +V LK +GY E + +P + F GDN++++ Sbjct: 1 MPREKPHINVVFIGHVDHGKSTTVGRLKYDLGLIPESELEKIREEAKKYGKEEFVFAYLMDRQKEERARGVTIDIAHTELETPHNYITIVDAPGHKDFVKNMITGASQADAAVLVVAADDGVQE-------QTQEHAVLARTFGINQIIVYINKMDKV--NYDQKRFEEVKNQVLKLLKMIGYKDENIIAVIPGASFHGDNVVKK 196
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: ERF3_DEBHA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Debaryomyces hansenii GN=SUP35 PE=3 SV=4) HSP 1 Score: 183.341 bits (464), Expect = 1.039e-45 Identity = 83/200 (41.50%), Postives = 133/200 (66.50%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIER 693 K H++I+ +GHVD+GKST G+++Y G +DKR ++++E+EA + ++ + +WV+D K ER G TI++ FET K T++DAPGH+ ++ MI G SQAD +L+I + G +E G K GQTREHALLA T GV ++I NKMD T +++ RY + + ++ ++LK +GY + + F+P+SG+ G + +R Sbjct: 276 KDHVSIIFMGHVDAGKSTMGGNILYLTGSVDKRTVDKYEREAKDAGRQGWYLSWVMDTNKEERSDGKTIEVGKAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGILVISARKGEYETGFEKGGQTREHALLAKTQGVNKIIVVVNKMDDPTVGWAEDRYKDCITKLGTFLKGIGYAKDDIIFMPVSGYTGAGIKDR 475
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: HBS1_SCHPO (Elongation factor 1 alpha-like protein OS=Schizosaccharomyces pombe GN=hbs1 PE=2 SV=4) HSP 1 Score: 182.185 bits (461), Expect = 2.314e-45 Identity = 93/201 (46.27%), Postives = 130/201 (64.68%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYL-KKVGYNPEKVPFVPISGFEGDNMIER 693 K +++VV GHVDSGKST G ++++LG I+ R +++ EAA K SF YAW+LD + ER RG+T+D+A FE+ K + DAPGHRDFI MI G S AD AVL++DS+ FE G ++GQTREHA L LG+ +++ NK+D + +S+ R+ EI VS +L K VG+ V FVPIS G N+I++ Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGISEIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPISAISGTNLIQK 373
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: ERF3_DICDI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Dictyostelium discoideum GN=erf3 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 3.946e-45 Identity = 90/199 (45.23%), Postives = 136/199 (68.34%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEK-VPFVPISGFEGDNMI 687 + H+NIV +GHVD+GKST +G ++ G +D + ++E+EA E ++ + YA+++D + ER +G T+++ FETTK T++DAPGHR ++ NMI G +QAD +L+I S G FEAG+ + GQT EHA LA +G+K ++ NKMD T K+SKARYDEI +++ +LKK G+NP+K FVP SG+ N++ Sbjct: 115 REHLNIVFLGHVDAGKSTLSGSIMVLTGQVDPHTLAKYEREAKENHREGWIYAYIMDTNEEERTKGKTVEVGRAHFETTKKRYTILDAPGHRLYVPNMIIGAAQADVGILVISSKKGEFEAGV-EGGQTIEHARLAKMIGIKYLVVFVNKMDEPTVKWSKARYDEITDKLTVHLKKCGWNPKKDFHFVPGSGYGTLNVL 312
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.154e-45 Identity = 93/204 (45.59%), Postives = 127/204 (62.25%), Query Frame = 1 Query: 82 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIER 693 M KEK H+N+ IGHVD GKST GHL+ + G I ++ + E K+ +V+D+L ERERG+TID+A KFET KY T++D PGHRDF+KNMITG SQAD AVL++ G QT+EH L+ TLG+ Q+I NKMD Y + +++ + EV++ +K VGY P V F+P+S FEGDN+ + Sbjct: 1 MAKEKEHMNLAFIGHVDHGKSTLVGHLLLQAGAIAEQQLAEGED----------KFRFVMDRLSEERERGVTIDLAHAKFETDKYEFTIVDCPGHRDFVKNMITGASQADAAVLVVAVDDGVMP-------QTKEHVFLSRTLGINQLIVAINKMDLV--NYDEEKFNALKDEVAALIKTVGYKPSDVEFIPLSAFEGDNITSK 185
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_ENCCU (Elongation factor 1-alpha OS=Encephalitozoon cuniculi GN=TEF1 PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41 Identity = 84/200 (42.00%), Postives = 127/200 (63.50%), Query Frame = 1 Query: 94 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIER 693 K +N IGHVDSGKSTT G L Y+LG +DKR +E++EKEAA NK +F A++ DK AER+RGITI L T K+ ++D PGH+DF+KNM+TG SQAD AV+I+ ++ GFE+ + G + H +++ LG +++I C NKMD +++E+ E+ +K+ + + +PIS F+G N+ ++ Sbjct: 44 KPRLNACFIGHVDSGKSTTVGMLSYQLGAVDKREMEKYEKEAALNNKETFYLAYLTDKTDAERKRGITITTTLVNLPTEKFNINILDCPGHKDFVKNMVTGASQADVAVVIVPAS--GFESCVGVGGMLKTHIMISGILGCEKLIVCVNKMDEIPENKRMEKFNEVSAEMLRIVKR-SHKDKNPIIIPISAFKGINLTKK 240
BLAST of FC925420 vs. ExPASy Swiss-Prot
Match: EF1A_EIMBO (Elongation factor 1-alpha (Fragment) OS=Eimeria bovis PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.272e-35 Identity = 75/101 (74.26%), Postives = 84/101 (83.17%), Query Frame = 1 Query: 394 GTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP-KYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIER 693 GTSQAD A+L++ + GGFE SK+GQTREHALLAFTLGVKQMI NKMDATTP KYS+ R++EI EVS YLK VGYNPEKVPFVPISGF GDNM+ER Sbjct: 1 GTSQADVALLVVPADQGGFEGAFSKEGQTREHALLAFTLGVKQMIVGINKMDATTPDKYSETRFNEIQAEVSRYLKTVGYNPEKVPFVPISGFMGDNMVER 101 The following BLAST results are available for this feature:
BLAST of FC925420 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925420 ID=FC925420; Name=FC925420; organism=Citrus clementina; type=EST; length=693bpback to top |