FC925425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 203.371 bits (516), Expect = 6.961e-52 Identity = 101/174 (58.05%), Postives = 129/174 (74.14%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P V L + + + +L PLV +MK+EK P TY IGGLD QI+EIKE +ELP+ PE +E +GI PKGV+LYGPPGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A EH PSI+F+DEID+ G+ R S S G+ E+QRTMLELLNQL+G Sbjct: 146 PGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNS-GGEREIQRTMLELLNQLDG 318
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS4_CAEEL (Probable 26S protease regulatory subunit 4 OS=Caenorhabditis elegans GN=rpt-2 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 9.092e-52 Identity = 99/174 (56.90%), Postives = 132/174 (75.86%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P V L + ++ + +L P+V++MK+EK P TY +GGLDQQI+EIKE +ELP+ PE +E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+R+ GSEL+QKY+G+G +MVRELF +A E+APSI+F+DEID+ G+ R S S G+ E+QRTMLELLNQL+G Sbjct: 149 PGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNS-GGEREIQRTMLELLNQLDG 321
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3) HSP 1 Score: 202.601 bits (514), Expect = 1.187e-51 Identity = 104/190 (54.74%), Postives = 132/190 (69.47%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 K+VV RV + + Y +H+ LP K+ P V +M+VE+ PD TY +GG +QI++++EV+E P+ PE F +LGI PKGVLL+GPPGTGKTL ARAVA+ TD FI V GSELVQKY+GEG+RMVRELF MAR +IF DEID+ G AR G+ GD+EVQRTMLEL+NQL+G Sbjct: 120 KFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA-GGDNEVQRTMLELINQLDG 308
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.645e-51 Identity = 104/190 (54.74%), Postives = 131/190 (68.95%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 K+VV RV + + Y + + LP K+ P V +M VE+ PD TY+ +GG +QI++++EV+ELP+ PE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+ G AR G GD+EVQRTMLE++NQL+G Sbjct: 113 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV-GGDNEVQRTMLEIVNQLDG 301
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.645e-51 Identity = 104/190 (54.74%), Postives = 131/190 (68.95%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 K+VV RV + + Y + + LP K+ P V +M VE+ PD TY+ +GG +QI++++EV+ELP+ PE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+ G AR G GD+EVQRTMLE++NQL+G Sbjct: 112 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV-GGDNEVQRTMLEIVNQLDG 300
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.645e-51 Identity = 104/190 (54.74%), Postives = 131/190 (68.95%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 K+VV RV + + Y + + LP K+ P V +M VE+ PD TY+ +GG +QI++++EV+ELP+ PE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+ G AR G GD+EVQRTMLE++NQL+G Sbjct: 113 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV-GGDNEVQRTMLEIVNQLDG 301
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1) HSP 1 Score: 201.445 bits (511), Expect = 2.645e-51 Identity = 104/190 (54.74%), Postives = 131/190 (68.95%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 K+VV RV + + Y + + LP K+ P V +M VE+ PD TY+ +GG +QI++++EV+ELP+ PE F LGI PKGVL YGPPGTGKTLLARAVA+ TD FIRV GSELVQKY+GEG+RMVRELF MAR I+F DE+D+ G AR G GD+EVQRTMLE++NQL+G Sbjct: 113 KFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV-GGDNEVQRTMLEIVNQLDG 301
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS7_DICDI (26S protease regulatory subunit 7 OS=Dictyostelium discoideum GN=psmC2 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.005e-50 Identity = 101/190 (53.16%), Postives = 132/190 (69.47%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 K+VV RV + + Y + + LP K+ V +M+VE+ PD TY +GG +QI++++EV+E+P+ PE F +LGI PKGVL+YGPPGTGKTL ARAVA+ TD F+RV GSELVQKY+GEG+RMVR+LF MAR IIF DE+D+ G AR G+ GD+EVQRTMLEL+NQL+G Sbjct: 115 KFVVALGDKLSPTDVEEGIRVGVDRNKYQIQIPLPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGARFDDGA-GGDNEVQRTMLELINQLDG 303
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.715e-50 Identity = 103/190 (54.21%), Postives = 136/190 (71.58%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 K+VV P RVAL + + +LP+ P+V +VE+ P+ +Y+ IGGLD QI+EI+E +ELP+ PELF +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIRV GSE VQKYIGEG+R+VRE+F +A+E APSIIF+DE+D+ +AR + +GD EVQRTM++LL +L+G Sbjct: 86 KFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAI-AARRTNSDTSGDREVQRTMMQLLAELDG 274
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.715e-50 Identity = 99/170 (58.24%), Postives = 131/170 (77.06%), Query Frame = 1 Query: 76 VALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 V L N + + ++ +V P+VN+MKVEK P +Y IGGL+ Q++E+KE IELP+ PEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A E APSI+F+DEID+ G+ R S S G+ E+QRTMLELLNQL+G Sbjct: 149 VLLNNKTLSVVGVIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQS-GGEREIQRTMLELLNQLDG 317 The following BLAST results are available for this feature:
BLAST of FC925425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925425 ID=FC925425; Name=FC925425; organism=Citrus clementina; type=EST; length=587bpback to top |