FC925425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 2.925e-50 Identity = 104/190 (54.74%), Postives = 134/190 (70.53%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 K+VV P +VAL S + +LP+ P V M+V P+ Y IGGL+ QI E+KE +ELP+ PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+ T TFIR+ GSELVQKYIGEG+RMVRELF +A+E +PSIIF+DEIDS G+ R+ S +GD EVQRT+++LL +++G Sbjct: 104 KFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAKEKSPSIIFIDEIDSIGAKRLDS-ITSGDREVQRTLVQLLAEMDG 292
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS4_ORYSJ (26S protease regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica GN=TBP2 PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.452e-49 Identity = 99/174 (56.90%), Postives = 131/174 (75.29%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P + + N + IL +V P+V++MKVEK P +Y IGGLD QI+EIKE +ELP+ PEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A E +PSI+F+DEID+ G+ R + S G+ E+QRTMLELLNQL+G Sbjct: 154 PGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHS-GGEREIQRTMLELLNQLDG 326
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PSMR_METMJ (Proteasome-activating nucleotidase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pan PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.896e-49 Identity = 97/174 (55.75%), Postives = 132/174 (75.86%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P R L S + +LP+ + M++ + P+ TY+ IGGL+ QI+EI+E +ELP+ P+LFE +GI+ PKGVLLYGPPGTGKTLLARAVAH T+ F+RV GSELVQKYIGEG+R+VRELF +A++ APSIIF+DEID+ G+ R S + +GD EVQRT+++LL +++G Sbjct: 114 PGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDS-TTSGDREVQRTLMQLLAEMDG 286
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS7B_ARATH (26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPT1B PE=3 SV=2) HSP 1 Score: 194.897 bits (494), Expect = 2.476e-49 Identity = 105/190 (55.26%), Postives = 127/190 (66.84%), Query Frame = 1 Query: 16 KYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 KYVV RV + Y + + LP K+ P V +M VE+ PD+TY IGG +QI++I+EV+ELP+ PE F LGI PKGVL YGPPG+GKTL+ARAVA+ T FIRV GSELVQKYIGEG+RMVRELF MAR I+F DEID+ G AR G D+EVQRTMLE+L QL+G Sbjct: 150 KYVVGLGDKASPTDIEAGMRVGVDQKKYQIQIPLPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACILFFDEIDAIGGARFDDGV-GSDNEVQRTMLEILYQLDG 338
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 3.234e-49 Identity = 96/158 (60.76%), Postives = 125/158 (79.11%), Query Frame = 1 Query: 112 ILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 +L ++ P+VN+MK+EK P TY IGGL++QI+EIKE +ELP+ PEL++ +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV G+EL+Q+Y+GEG ++VRELF +A HAPSIIF+DEID+ G R + S G EVQRTMLELLNQL+G Sbjct: 146 VLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVANQTSATFLRVVGTELIQEYLGEGPKLVRELFRVADMHAPSIIFIDEIDAIGGKRYNTSS-GGRREVQRTMLELLNQLDG 302
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 5.516e-49 Identity = 95/174 (54.60%), Postives = 129/174 (74.14%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P V L + + + +L P++N+MK++K P +Y IGGL+ QI+EIKE +ELP+ PEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G R+VR+LF A EH+PSI+F+DEID+ G+ R + S + E+QRTMLELLNQL+G Sbjct: 152 PGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQS-GAEREIQRTMLELLNQLDG 324
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 5.516e-49 Identity = 97/174 (55.75%), Postives = 131/174 (75.29%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P + + N + IL +V P+V++MKVEK P +Y IGGL+ QI+EIKE +ELP+ PEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A + +PSI+F+DEID+ G+ R + S G+ E+QRTMLELLNQL+G Sbjct: 149 PGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDANS-GGEREIQRTMLELLNQLDG 321
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 7.204e-49 Identity = 101/174 (58.05%), Postives = 129/174 (74.14%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P VAL N + +LP + PLV M+VE+ P + +GGL++QI+EI E + LPIK P LF LGI PKGVLL+GPPGTGKTLLA+AVA T+ TFIRV GSELV K+IGEG+R+VRE+F +ARE APSI+F+DEID+ S R+ G+ +GD EVQRTML+LL +L+G Sbjct: 100 PGAIVALNNRGSTIVDVLPGRYDPLVKAMEVEERPKVFFKDVGGLEEQIREIYEAVVLPIKNPHLFRELGIDPPKGVLLHGPPGTGKTLLAKAVAGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGT-SGDREVQRTMLQLLAELDG 272
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 192.971 bits (489), Expect = 9.409e-49 Identity = 97/174 (55.75%), Postives = 131/174 (75.29%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P + + N + IL +V P+V++MKVEK P +Y IGGL+ QI+EIKE +ELP+ PEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T TF+RV GSEL+QKY+G+G ++VRELF +A + +PSI+F+DEID+ G+ R + S G+ E+QRTMLELLNQL+G Sbjct: 149 PGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS-GGEREIQRTMLELLNQLDG 321
BLAST of FC925425 vs. ExPASy Swiss-Prot
Match: PSMR_METPE (Proteasome-activating nucleotidase OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=pan PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.229e-48 Identity = 95/174 (54.60%), Postives = 130/174 (74.71%), Query Frame = 1 Query: 64 PSTRVALRNDSYVLHLILPSKVYPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKPPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSTGSARMQSGSRNGDSEVQRTMLELLNQLEG 585 P R L S + ILP+ + M+V + P Y+ IGGL++QI EI+E +ELP+K PE+F +GI PKGVLL+GPPGTGKTLLARAVAH T+ F+RV GSELVQKYIGEG+R+VRELF +A++ +PSIIF+DEID+ G++R +S + +GD EV RT+++LL +++G Sbjct: 114 PGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNT-SGDREVHRTLMQLLAEMDG 286 The following BLAST results are available for this feature:
BLAST of FC925425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925425 ID=FC925425; Name=FC925425; organism=Citrus clementina; type=EST; length=587bpback to top |